Variant report

Variant	rs182622998
Chromosome Location	chr19:51714787-51714788
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1066308	chr19:51680133-52103974	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	71 gene(s)	inside rSNPs	diseases
2	nsv544049	chr19:51680133-52103974	Bivalent Enhancer Strong transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	71 gene(s)	inside rSNPs	diseases
3	esv3327113	chr19:51714613-51728152	Strong transcription Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:51704800-51715000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr19:51713400-51715400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr19:51713400-51715800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
4	chr19:51713600-51715600	Enhancers	Primary hematopoietic stem cells	blood
5	chr19:51713800-51714800	Enhancers	Primary B cells from cord blood	blood
6	chr19:51714000-51715000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
7	chr19:51714000-51715400	Enhancers	Spleen	Spleen
8	chr19:51714200-51715200	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
9	chr19:51714200-51715200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
10	chr19:51714200-51715200	Active TSS	Hela-S3	cervix
11	chr19:51714400-51714800	Active TSS	Brain Hippocampus Middle	brain
12	chr19:51714400-51715200	Active TSS	Primary mononuclear cells fromperipheralblood	Blood
13	chr19:51714400-51715200	Enhancers	Lung	lung
14	chr19:51714600-51715400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr19:51714600-51716000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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