Variant report

Variant	rs182652066
Chromosome Location	chr11:83811205-83811206
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1039924	chr11:83662904-83993497	Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv541102	chr11:83662904-83993497	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv898028	chr11:83717887-83817360	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
4	nsv898029	chr11:83717887-83939591	Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	esv2751034	chr11:83801970-83840272	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	n/a
6	esv3421494	chr11:83809929-83812477	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
7	esv3429174	chr11:83810004-83812377	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
8	esv3478753	chr11:83810753-83811335	Weak transcription	n/a	n/a	inside rSNPs	n/a
9	esv3478764	chr11:83810880-83811299	Weak transcription	n/a	n/a	inside rSNPs	n/a
10	nsv27498	chr11:83811205-83811206	Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83801400-83813400	Weak transcription	Brain Germinal Matrix	brain
2	chr11:83802600-83812200	Weak transcription	Brain Anterior Caudate	brain
3	chr11:83803000-83812600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr11:83803400-83811600	Weak transcription	Brain Angular Gyrus	brain
5	chr11:83808600-83812200	Weak transcription	Brain Cingulate Gyrus	brain
6	chr11:83808600-83812800	Weak transcription	Brain Substantia Nigra	brain
7	chr11:83809800-83811600	Weak transcription	Brain Inferior Temporal Lobe	brain
8	chr11:83810200-83812600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr11:83810400-83812200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr11:83810600-83812200	Weak transcription	Brain Hippocampus Middle	brain
11	chr11:83810600-83812400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr11:83810600-83812600	Weak transcription	Fetal Heart	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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