Variant report

Variant	rs182672691
Chromosome Location	chr21:41521818-41521819
allele	A/C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr21:41515156..41518019-chr21:41520939..41525508,4	MCF-7	breast:
2	chr21:41510559..41522908-chr21:41685904..41699622,30	MCF-7	breast:
3	chr21:41507356..41527112-chr21:41751014..41762921,70	MCF-7	breast:
4	chr21:41521642..41524306-chr21:41752532..41754140,2	MCF-7	breast:
5	chr21:41520868..41523262-chr21:41758481..41760661,3	MCF-7	breast:
6	chr21:41513242..41523747-chr21:41704483..41713607,25	MCF-7	breast:
7	chr21:41520522..41522744-chr21:41548382..41550517,2	MCF-7	breast:
8	chr21:41520005..41522029-chr21:41524160..41526539,2	MCF-7	breast:
9	chr21:41518203..41520436-chr21:41521681..41524001,2	MCF-7	breast:

No data

No data

No data

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3437178	chr21:41519182-41523880	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv3416951	chr21:41519682-41522680	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv3379833	chr21:41521049-41521950	Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	esv3455496	chr21:41521082-41521919	Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	esv3455498	chr21:41521082-41521919	Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	esv4745	chr21:41521096-41522003	Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
7	esv3512107	chr21:41521113-41521908	Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
8	esv3512109	chr21:41521113-41521908	Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:41505000-41526400	Weak transcription	Fetal Muscle Leg	muscle
2	chr21:41510800-41525800	Weak transcription	Brain Germinal Matrix	brain
3	chr21:41513200-41523200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr21:41513400-41524400	Weak transcription	Fetal Brain Female	brain
5	chr21:41517200-41528800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr21:41518200-41522800	Weak transcription	Fetal Heart	heart
7	chr21:41519400-41523200	Weak transcription	Cortex derived primary cultured neurospheres	brain

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links