Variant report

Variant	rs182791706
Chromosome Location	chr6:79646563-79646564
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:79643799..79646665-chr6:79651824..79654665,2	K562	blood:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1015352	chr6:79521820-79757024	Weak transcription Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	esv3362036	chr6:79646533-79650631	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region miRNA target site	n/a	inside rSNPs	diseases

No data

Chromatin state (count:67 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:79639600-79650400	Weak transcription	HSMMtube	muscle
2	chr6:79640400-79655000	Weak transcription	Brain Cingulate Gyrus	brain
3	chr6:79640600-79648800	Weak transcription	Fetal Kidney	kidney
4	chr6:79641400-79647000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr6:79641600-79650200	Weak transcription	Cortex derived primary cultured neurospheres	brain
6	chr6:79642400-79649400	Weak transcription	Adipose Nuclei	Adipose
7	chr6:79642400-79650000	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr6:79642400-79653000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr6:79642600-79649400	Weak transcription	Brain Hippocampus Middle	brain
10	chr6:79642600-79649400	Weak transcription	Osteobl	bone
11	chr6:79642600-79658200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr6:79642800-79649000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr6:79642800-79649400	Weak transcription	Fetal Lung	lung
14	chr6:79642800-79650400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
15	chr6:79643200-79648800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr6:79643200-79649000	Weak transcription	GM12878-XiMat	blood
17	chr6:79643200-79649400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr6:79643200-79653000	Weak transcription	HMEC	breast
19	chr6:79643400-79648000	Weak transcription	HUVEC	blood vessel
20	chr6:79643600-79646600	Enhancers	Fetal Heart	heart
21	chr6:79643600-79650200	Weak transcription	Fetal Muscle Trunk	muscle
22	chr6:79643600-79651600	Weak transcription	Primary T cells from cord blood	blood
23	chr6:79643800-79648800	Weak transcription	Primary neutrophils fromperipheralblood	blood
24	chr6:79643800-79648800	Weak transcription	Duodenum Mucosa	Duodenum
25	chr6:79643800-79649000	Weak transcription	Primary B cells from cord blood	blood
26	chr6:79644000-79646800	Weak transcription	Hela-S3	cervix
27	chr6:79644000-79647200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
28	chr6:79644000-79649400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
29	chr6:79644000-79658600	Strong transcription	Dnd41	blood
30	chr6:79644200-79648000	Weak transcription	Primary T helper cells fromperipheralblood	blood
31	chr6:79644400-79648800	Weak transcription	HUES6 Cell Line	embryonic stem cell
32	chr6:79644400-79648800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
33	chr6:79644400-79650200	Weak transcription	Primary T helper cells PMA-I stimulated	--
34	chr6:79644400-79650400	Weak transcription	Fetal Brain Male	brain
35	chr6:79644400-79651600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
36	chr6:79644600-79649000	Weak transcription	Rectal Mucosa Donor 29	rectum
37	chr6:79644600-79649400	Weak transcription	Fetal Intestine Large	intestine
38	chr6:79644600-79649600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
39	chr6:79644600-79654000	Weak transcription	Brain Substantia Nigra	brain
40	chr6:79644800-79655400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
41	chr6:79645000-79646600	Weak transcription	Liver	Liver
42	chr6:79645000-79647200	Weak transcription	Placenta	Placenta
43	chr6:79645000-79649600	Weak transcription	Fetal Thymus	thymus
44	chr6:79645000-79657400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr6:79645200-79648800	Weak transcription	Duodenum Smooth Muscle	Duodenum
46	chr6:79645600-79647200	Weak transcription	Primary B cells from peripheral blood	blood
47	chr6:79645600-79648400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
48	chr6:79645600-79653200	Weak transcription	Rectal Smooth Muscle	rectum
49	chr6:79645600-79658200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
50	chr6:79645600-79658600	Strong transcription	HUES64 Cell Line	embryonic stem cell

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