Variant report

Variant	rs182862102
Chromosome Location	chr18:30383365-30383366
allele	A/C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758474	chr18:30383327-30574737	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv2758720	chr18:30383327-30574737	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:30380400-30385000	Enhancers	Primary B cells from peripheral blood	blood
2	chr18:30380600-30385200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr18:30381000-30384400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr18:30381000-30384800	Enhancers	Primary B cells from cord blood	blood
5	chr18:30382800-30384800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr18:30383000-30383400	Flanking Active TSS	GM12878-XiMat	blood
7	chr18:30383000-30383600	Flanking Active TSS	HepG2	liver
8	chr18:30383200-30383400	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr18:30383200-30383400	Flanking Active TSS	Fetal Kidney	kidney

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links