Variant report

Variant	rs182938409
Chromosome Location	chr8:130426652-130426653
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429942	chr8:130397818-130460011	Weak transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv6394	chr8:130421502-130446035	Genic enhancers Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	esv3419619	chr8:130426225-130426740	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130410200-130434600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:130419800-130427000	Weak transcription	Thymus	Thymus
3	chr8:130424200-130427600	Weak transcription	GM12878-XiMat	blood
4	chr8:130425000-130427800	Weak transcription	Fetal Stomach	stomach
5	chr8:130426000-130426800	Weak transcription	Fetal Thymus	thymus
6	chr8:130426200-130427400	Enhancers	Dnd41	blood
7	chr8:130426400-130428400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr8:130426600-130427000	Weak transcription	Monocytes-CD14+_RO01746	blood
9	chr8:130426600-130428400	Enhancers	Primary monocytes fromperipheralblood	blood
10	chr8:130426600-130430800	Genic enhancers	K562	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links