Variant report

Variant	rs182965181
Chromosome Location	chr14:39958150-39958151
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3523177	chr14:39875036-40128325	Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
2	esv3523178	chr14:39875036-40128325	Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
3	nsv832774	chr14:39897746-40060823	Weak transcription Active TSS ZNF genes & repeats Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
4	nsv915558	chr14:39944831-40165370	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	nsv456212	chr14:39957437-40096888	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
6	nsv564418	chr14:39957437-40096888	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Strong transcription	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:39957200-39959200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr14:39957200-39959600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr14:39957400-39958600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr14:39957600-39958400	Enhancers	Cortex derived primary cultured neurospheres	brain
5	chr14:39957600-39958400	Enhancers	Fetal Brain Female	brain
6	chr14:39957600-39958600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr14:39957600-39958800	Enhancers	Brain Germinal Matrix	brain
8	chr14:39957800-39958200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr14:39957800-39958200	Enhancers	Brain Hippocampus Middle	brain
10	chr14:39957800-39958400	Enhancers	iPS-18 Cell Line	embryonic stem cell
11	chr14:39958000-39958200	Enhancers	H1 Cell Line	embryonic stem cell
12	chr14:39958000-39958200	Enhancers	HUES6 Cell Line	embryonic stem cell
13	chr14:39958000-39958200	Enhancers	HUES64 Cell Line	embryonic stem cell
14	chr14:39958000-39959400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links