Variant report

Variant	rs182967727
Chromosome Location	chr20:15617614-15617615
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869328	chr20:15325423-16213898	Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription Bivalent Enhancer Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	esv2751909	chr20:15489871-15656007	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	esv3394944	chr20:15617500-15617705	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:15616600-15619200	Enhancers	H1 Cell Line	embryonic stem cell
2	chr20:15616800-15617800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr20:15616800-15619400	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr20:15616800-15619800	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr20:15617000-15618400	Enhancers	iPS-20b Cell Line	embryonic stem cell
6	chr20:15617000-15619600	Enhancers	Breast Myoepithelial Primary Cells	Breast
7	chr20:15617000-15619800	Enhancers	HUES64 Cell Line	embryonic stem cell
8	chr20:15617000-15619800	Enhancers	iPS-18 Cell Line	embryonic stem cell
9	chr20:15617000-15620400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr20:15617200-15618600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
11	chr20:15617200-15619800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr20:15617200-15619800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr20:15617400-15618400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
14	chr20:15617400-15619200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
15	chr20:15617600-15617800	Enhancers	H9 Cell Line	embryonic stem cell
16	chr20:15617600-15618000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
17	chr20:15617600-15619200	Enhancers	Fetal Lung	lung
18	chr20:15617600-15629000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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