Variant report

Variant rs183060628
Chromosome Location chr11:64409600-64409601
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:64403000-64410400 Weak transcription Aorta Aorta
2 chr11:64406000-64409600 Weak transcription HSMMtube muscle
3 chr11:64406000-64409800 Weak transcription Right Atrium heart
4 chr11:64406600-64410800 Active TSS Brain Angular Gyrus brain
5 chr11:64406800-64411400 Active TSS Brain Anterior Caudate brain
6 chr11:64408200-64409800 Strong transcription HSMM muscle
7 chr11:64408400-64409600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr11:64408400-64409600 Flanking Active TSS Fetal Brain Female brain
9 chr11:64408400-64409800 Enhancers Ovary ovary
10 chr11:64408400-64410000 Flanking Active TSS Fetal Brain Male brain
11 chr11:64408600-64409600 Bivalent/Poised TSS Stomach Smooth Muscle stomach
12 chr11:64408800-64411400 Weak transcription Gastric stomach
13 chr11:64409200-64409600 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr11:64409200-64409600 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
15 chr11:64409200-64409600 Flanking Bivalent TSS/Enh Rectal Smooth Muscle rectum
16 chr11:64409200-64409800 Flanking Active TSS Brain Cingulate Gyrus brain
17 chr11:64409200-64409800 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
18 chr11:64409200-64410000 Flanking Bivalent TSS/Enh Fetal Stomach stomach
19 chr11:64409200-64410400 Bivalent Enhancer Fetal Thymus thymus
20 chr11:64409200-64410600 Bivalent Enhancer Primary T helper cells fromperipheralblood blood
21 chr11:64409200-64411000 Bivalent/Poised TSS Fetal Intestine Small intestine
22 chr11:64409200-64411400 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
23 chr11:64409200-64411400 Bivalent/Poised TSS Fetal Muscle Trunk muscle
24 chr11:64409200-64411600 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
25 chr11:64409400-64409600 Bivalent Enhancer H1 Cell Line embryonic stem cell
26 chr11:64409400-64409600 Bivalent/Poised TSS Ganglion Eminence derived primary cultured neurospheres brain
27 chr11:64409400-64409600 Bivalent/Poised TSS Brain Inferior Temporal Lobe brain
28 chr11:64409400-64409600 Bivalent Enhancer Brain Substantia Nigra brain
29 chr11:64409400-64409600 Active TSS Colon Smooth Muscle Colon
30 chr11:64409400-64409600 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
31 chr11:64409400-64409600 Bivalent/Poised TSS Fetal Kidney kidney
32 chr11:64409400-64409600 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
33 chr11:64409400-64409800 Flanking Bivalent TSS/Enh H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr11:64409400-64409800 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
35 chr11:64409400-64409800 Bivalent Enhancer Breast Myoepithelial Primary Cells Breast
36 chr11:64409400-64409800 Bivalent/Poised TSS Rectal Mucosa Donor 29 rectum
37 chr11:64409400-64410000 Bivalent Enhancer Primary T helper naive cells fromperipheralblood blood
38 chr11:64409400-64410000 Bivalent Enhancer Primary T killer naive cells fromperipheralblood blood
39 chr11:64409400-64410000 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr11:64409400-64410000 Flanking Active TSS Brain Germinal Matrix brain
41 chr11:64409400-64410000 Bivalent/Poised TSS Brain Hippocampus Middle brain
42 chr11:64409400-64410000 Flanking Bivalent TSS/Enh Fetal Lung lung
43 chr11:64409400-64410400 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
44 chr11:64409400-64410400 Flanking Bivalent TSS/Enh Cortex derived primary cultured neurospheres brain
45 chr11:64409400-64410400 Bivalent/Poised TSS Fetal Intestine Large intestine
46 chr11:64409400-64410400 Enhancers Spleen Spleen
47 chr11:64409400-64410600 Bivalent Enhancer Primary T helper naive cells from peripheral blood blood
48 chr11:64409400-64410800 Bivalent Enhancer Primary T helper cells PMA-I stimulated --
49 chr11:64409400-64411000 Bivalent Enhancer Primary T cells fromperipheralblood blood
50 chr11:64409400-64411200 Active TSS Brain Dorsolateral Prefrontal Cortex brain

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