The 2.0 version of rSNPBase

Variant report

Variant rs183124173
Chromosome Location chr1:180133567-180133568
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180124800-180151000 Weak transcription Aorta Aorta
2 chr1:180125000-180136000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr1:180125200-180134600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr1:180125200-180137400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr1:180125200-180150400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr1:180125400-180134800 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr1:180125600-180136400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
8 chr1:180125600-180159200 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr1:180125800-180135800 Weak transcription Primary T cells from cord blood blood
10 chr1:180126000-180135600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr1:180126000-180136800 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr1:180126000-180151000 Weak transcription Primary B cells from peripheral blood blood
13 chr1:180126000-180151400 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr1:180126200-180133600 Weak transcription Brain Germinal Matrix brain
15 chr1:180126200-180136600 Weak transcription Colon Smooth Muscle Colon
16 chr1:180126200-180152400 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr1:180126400-180153800 Weak transcription Primary T helper cells fromperipheralblood blood
18 chr1:180126600-180134400 Weak transcription Brain Angular Gyrus brain
19 chr1:180126600-180135600 Weak transcription Primary T cells fromperipheralblood blood
20 chr1:180126600-180135600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr1:180126800-180134800 Weak transcription Placenta Amnion Placenta Amnion
22 chr1:180126800-180135000 Enhancers Primary neutrophils fromperipheralblood blood
23 chr1:180126800-180135800 Weak transcription Hela-S3 cervix
24 chr1:180127200-180134000 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr1:180127200-180134600 Weak transcription Brain Cingulate Gyrus brain
26 chr1:180127200-180136000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr1:180127200-180137400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr1:180127200-180140400 Weak transcription GM12878-XiMat blood
29 chr1:180127400-180142800 Weak transcription HSMM muscle
30 chr1:180127600-180134400 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr1:180127600-180134400 Weak transcription Stomach Smooth Muscle stomach
32 chr1:180127600-180134600 Weak transcription Brain Anterior Caudate brain
33 chr1:180127600-180137400 Weak transcription K562 blood
34 chr1:180127600-180142600 Weak transcription Rectal Smooth Muscle rectum
35 chr1:180127800-180134400 Weak transcription Fetal Brain Female brain
36 chr1:180127800-180135400 Weak transcription NHDF-Ad bronchial
37 chr1:180127800-180136200 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr1:180127800-180136600 Weak transcription HUVEC blood vessel
39 chr1:180127800-180136800 Weak transcription Muscle Satellite Cultured Cells --
40 chr1:180127800-180137200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr1:180128600-180135400 Weak transcription Duodenum Mucosa Duodenum
42 chr1:180128600-180135800 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr1:180128600-180137000 Weak transcription Fetal Intestine Large intestine
44 chr1:180129000-180133600 Weak transcription Fetal Intestine Small intestine
45 chr1:180129000-180134600 Weak transcription Fetal Lung lung
46 chr1:180129000-180135600 Weak transcription Rectal Mucosa Donor 31 rectum
47 chr1:180129600-180134600 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr1:180129800-180135000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr1:180130000-180134400 Weak transcription Brain Substantia Nigra brain
50 chr1:180130000-180135400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015