Variant report

Variant	rs183207418
Chromosome Location	chr9:136704011-136704012
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:136702246..136705192-chr9:136714940..136717337,2	MCF-7	breast:
2	chr9:136701985..136719064-chr9:136732605..136742545,35	MCF-7	breast:
3	chr9:136700961..136707109-chr9:136726164..136730903,8	MCF-7	breast:
4	chr9:136702699..136705430-chr9:136757863..136760200,2	MCF-7	breast:
5	chr9:136681361..136683152-chr9:136703104..136705828,2	MCF-7	breast:
6	chr9:136703075..136705060-chr9:136717347..136720251,2	MCF-7	breast:
7	chr9:136701715..136704357-chr9:136781966..136784571,2	MCF-7	breast:
8	chr9:136703509..136705855-chr9:136737754..136741325,4	MCF-7	breast:

No data

Extended variants
information (count: 11 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:11 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894114	chr9:136538798-136779153	Flanking Active TSS Enhancers Genic enhancers Strong transcription Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv428546	chr9:136541745-136720872	Enhancers Strong transcription Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
3	nsv831745	chr9:136593702-136780273	Bivalent Enhancer Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
4	nsv894117	chr9:136600201-136716399	Strong transcription Weak transcription Genic enhancers Enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	nsv831746	chr9:136607829-136750740	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
6	nsv894122	chr9:136632662-136760639	Enhancers Weak transcription Strong transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
7	nsv1035272	chr9:136665308-136772256	Weak transcription Enhancers Strong transcription Active TSS Bivalent Enhancer Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
8	nsv894123	chr9:136682408-136852501	Weak transcription Enhancers Bivalent Enhancer Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
9	esv3437020	chr9:136702731-136705079	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
10	esv3389692	chr9:136703281-136704629	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
11	esv3345825	chr9:136703916-136704146	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:83 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:136658800-136705400	Weak transcription	Duodenum Smooth Muscle	Duodenum
2	chr9:136673200-136705000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr9:136675200-136728400	Weak transcription	Esophagus	oesophagus
4	chr9:136675400-136709400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
5	chr9:136675600-136704800	Weak transcription	Adipose Nuclei	Adipose
6	chr9:136677000-136705000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr9:136683800-136705000	Weak transcription	NHDF-Ad	bronchial
8	chr9:136684200-136704800	Weak transcription	Muscle Satellite Cultured Cells	--
9	chr9:136686000-136709600	Weak transcription	Brain Inferior Temporal Lobe	brain
10	chr9:136686600-136705000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr9:136687600-136705000	Weak transcription	HSMMtube	muscle
12	chr9:136689200-136704800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
13	chr9:136691400-136704800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
14	chr9:136691400-136705000	Weak transcription	Fetal Kidney	kidney
15	chr9:136691800-136704800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr9:136692000-136704800	Weak transcription	HUES48 Cell Line	embryonic stem cell
17	chr9:136692000-136704800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
18	chr9:136692000-136705000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr9:136692000-136705000	Weak transcription	HUES64 Cell Line	embryonic stem cell
20	chr9:136692000-136709800	Weak transcription	NH-A	brain
21	chr9:136692200-136705000	Weak transcription	Left Ventricle	heart
22	chr9:136692200-136705200	Weak transcription	Right Atrium	heart
23	chr9:136692400-136704800	Weak transcription	Fetal Lung	lung
24	chr9:136696200-136704800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
25	chr9:136696200-136704800	Weak transcription	HSMM	muscle
26	chr9:136697600-136704800	Weak transcription	Osteobl	bone
27	chr9:136697600-136709800	Weak transcription	Primary B cells from cord blood	blood
28	chr9:136698400-136718000	Weak transcription	Hela-S3	cervix
29	chr9:136698800-136704800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr9:136698800-136705200	Weak transcription	Stomach Smooth Muscle	stomach
31	chr9:136699000-136704400	Weak transcription	Primary monocytes fromperipheralblood	blood
32	chr9:136699000-136709600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
33	chr9:136699200-136708800	Weak transcription	Brain Hippocampus Middle	brain
34	chr9:136699400-136704200	Weak transcription	Monocytes-CD14+_RO01746	blood
35	chr9:136699400-136705200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
36	chr9:136699600-136705000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
37	chr9:136699600-136705200	Weak transcription	Liver	Liver
38	chr9:136699800-136704800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
39	chr9:136700000-136704200	Weak transcription	NHLF	lung
40	chr9:136700000-136709400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
41	chr9:136700000-136709600	Weak transcription	Gastric	stomach
42	chr9:136700800-136709800	Weak transcription	Primary B cells from peripheral blood	blood
43	chr9:136701000-136705000	Weak transcription	Fetal Brain Female	brain
44	chr9:136701000-136705000	Weak transcription	Placenta Amnion	Placenta Amnion
45	chr9:136701000-136707400	Weak transcription	NHEK	skin
46	chr9:136701000-136709800	Weak transcription	Brain Germinal Matrix	brain
47	chr9:136701200-136704200	Weak transcription	Right Ventricle	heart
48	chr9:136701400-136704200	Weak transcription	Placenta	Placenta
49	chr9:136701400-136704800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
50	chr9:136701400-136704800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell

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