Variant report

Variant	rs183285376
Chromosome Location	chr11:75061390-75061391
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:75039534..75040119-chr11:75061306..75062290,2	MCF-7	breast:
2	chr11:75043210..75047420-chr11:75061230..75064804,5	MCF-7	breast:

Variant related genes	Relation type
ENSG00000199090	Chromatin interaction

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1041640	chr11:74945824-75174688	Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS Genic enhancers Strong transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	94 gene(s)	inside rSNPs	diseases
2	nsv832211	chr11:74945839-75106125	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	66 gene(s)	inside rSNPs	diseases
3	nsv522447	chr11:74982939-75068767	Genic enhancers Enhancers Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA	57 gene(s)	inside rSNPs	diseases
4	esv3374722	chr11:75060004-75064302	Flanking Active TSS Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	n/a
5	esv3338679	chr11:75061154-75063652	Flanking Active TSS Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:75046800-75061600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
2	chr11:75048000-75061600	Enhancers	Sigmoid Colon	Sigmoid Colon
3	chr11:75052200-75061400	Enhancers	Primary T cells fromperipheralblood	blood
4	chr11:75052400-75061800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
5	chr11:75053400-75061600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr11:75054600-75062000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr11:75055400-75061400	Enhancers	Right Ventricle	heart
8	chr11:75055600-75061800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr11:75056000-75061600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr11:75056200-75062000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
11	chr11:75056600-75061800	Enhancers	Primary T helper naive cells from peripheral blood	blood
12	chr11:75057200-75062000	Enhancers	Fetal Heart	heart
13	chr11:75057400-75061800	Weak transcription	Primary B cells from peripheral blood	blood
14	chr11:75057400-75061800	Enhancers	NHDF-Ad	bronchial
15	chr11:75057600-75062600	Flanking Active TSS	Stomach Smooth Muscle	stomach
16	chr11:75057800-75061600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
17	chr11:75057800-75061600	Enhancers	NHLF	lung
18	chr11:75058000-75061600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
19	chr11:75058600-75062000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
20	chr11:75059200-75061800	Weak transcription	Fetal Kidney	kidney
21	chr11:75059400-75061600	Enhancers	Small Intestine	intestine
22	chr11:75059400-75061800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr11:75059400-75061800	Weak transcription	HMEC	breast
24	chr11:75059400-75062200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
25	chr11:75059600-75061600	Weak transcription	Muscle Satellite Cultured Cells	--
26	chr11:75059600-75061800	Weak transcription	NH-A	brain
27	chr11:75059800-75061800	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
28	chr11:75059800-75062000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr11:75060000-75062200	Flanking Active TSS	Duodenum Mucosa	Duodenum
30	chr11:75060000-75062400	Flanking Active TSS	HepG2	liver
31	chr11:75060000-75062600	Flanking Active TSS	Adipose Nuclei	Adipose
32	chr11:75060200-75061600	Enhancers	HUES48 Cell Line	embryonic stem cell
33	chr11:75060200-75061800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
34	chr11:75060200-75061800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
35	chr11:75060200-75061800	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
36	chr11:75060200-75061800	Flanking Active TSS	Brain Substantia Nigra	brain
37	chr11:75060200-75061800	Enhancers	Psoas Muscle	Psoas
38	chr11:75060200-75061800	Weak transcription	Osteobl	bone
39	chr11:75060200-75062200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
40	chr11:75060200-75062400	Flanking Active TSS	Brain Cingulate Gyrus	brain
41	chr11:75060200-75062400	Flanking Active TSS	Brain Hippocampus Middle	brain
42	chr11:75060200-75062400	Flanking Active TSS	Fetal Brain Female	brain
43	chr11:75060200-75062600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
44	chr11:75060400-75061800	Flanking Active TSS	Colon Smooth Muscle	Colon
45	chr11:75060400-75061800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
46	chr11:75060400-75062000	Transcr. at gene 5' and 3'	Fetal Stomach	stomach
47	chr11:75060400-75062200	Flanking Active TSS	Brain Angular Gyrus	brain
48	chr11:75060400-75062200	Flanking Active TSS	HUVEC	blood vessel
49	chr11:75060400-75062400	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
50	chr11:75060400-75062400	Flanking Active TSS	Hela-S3	cervix

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