Variant report

Variant	rs183341394
Chromosome Location	chrX:109940834-109940835
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817233	chrX:109693720-110244649	Weak transcription Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv7037	chrX:109927893-109972675	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
3	esv3484416	chrX:109938469-109942251	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	inside rSNPs	n/a
4	esv3484417	chrX:109938515-109942228	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	inside rSNPs	n/a
5	esv3484414	chrX:109938519-109942176	Enhancers Weak transcription Genic enhancers Strong transcription	n/a	n/a	inside rSNPs	n/a
6	esv3484418	chrX:109938519-109942176	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	inside rSNPs	n/a
7	esv3484415	chrX:109938534-109942212	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	inside rSNPs	n/a
8	esv14139	chrX:109938628-109942201	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	inside rSNPs	n/a
9	nsv515161	chrX:109938728-109941552	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	inside rSNPs	n/a
10	nsv438151	chrX:109939205-109941159	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:109919400-109948800	Weak transcription	Adipose Nuclei	Adipose
2	chrX:109936800-109941000	Weak transcription	Fetal Thymus	thymus
3	chrX:109937200-109941200	Weak transcription	Primary hematopoietic stem cells	blood
4	chrX:109939600-109943400	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chrX:109940800-109941200	Weak transcription	GM12878-XiMat	blood
6	chrX:109940800-109942400	Enhancers	Dnd41	blood
7	chrX:109940800-109942600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chrX:109940800-109942600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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