Variant report

Variant	rs183360185
Chromosome Location	chr7:120496708-120496709
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:120495769..120499665-chr7:120588624..120592417,7	MCF-7	breast:
2	chr7:120494775..120497431-chr7:120590834..120592743,2	K562	blood:

Variant related genes	Relation type
ENSG00000071243	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1818826	chr7:120405335-120622836	Strong transcription Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
2	nsv5929	chr7:120467591-120513472	Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
3	esv3438279	chr7:120496341-120498889	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:105 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:120490600-120496800	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr7:120494400-120498200	Active TSS	GM12878-XiMat	blood
3	chr7:120495800-120498600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr7:120495800-120498600	Active TSS	Left Ventricle	heart
5	chr7:120496000-120497000	Flanking Active TSS	Fetal Intestine Large	intestine
6	chr7:120496000-120499000	Active TSS	Fetal Kidney	kidney
7	chr7:120496200-120496800	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
8	chr7:120496200-120498800	Active TSS	Aorta	Aorta
9	chr7:120496200-120498800	Active TSS	Colon Smooth Muscle	Colon
10	chr7:120496200-120499000	Active TSS	Right Ventricle	heart
11	chr7:120496400-120496800	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr7:120496400-120496800	Flanking Bivalent TSS/Enh	HUES64 Cell Line	embryonic stem cell
13	chr7:120496400-120496800	Flanking Active TSS	iPS-15b Cell Line	embryonic stem cell
14	chr7:120496400-120496800	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 2	blood
15	chr7:120496400-120496800	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
16	chr7:120496400-120497000	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
17	chr7:120496400-120498600	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
18	chr7:120496400-120498600	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr7:120496400-120498800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr7:120496400-120498800	Active TSS	HUES6 Cell Line	embryonic stem cell
21	chr7:120496400-120498800	Active TSS	Stomach Smooth Muscle	stomach
22	chr7:120496600-120496800	Flanking Active TSS	H9 Cell Line	embryonic stem cell
23	chr7:120496600-120496800	Flanking Bivalent TSS/Enh	HUES48 Cell Line	embryonic stem cell
24	chr7:120496600-120496800	Flanking Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
25	chr7:120496600-120496800	Bivalent Enhancer	Primary T helper naive cells fromperipheralblood	blood
26	chr7:120496600-120496800	Bivalent Enhancer	Primary T helper cells PMA-I stimulated	--
27	chr7:120496600-120496800	Flanking Bivalent TSS/Enh	Primary T killer naive cells fromperipheralblood	blood
28	chr7:120496600-120496800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
29	chr7:120496600-120496800	Bivalent/Poised TSS	Foreskin Fibroblast Primary Cells skin02	Skin
30	chr7:120496600-120496800	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin02	Skin
31	chr7:120496600-120496800	Bivalent Enhancer	Primary mononuclear cells fromperipheralblood	Blood
32	chr7:120496600-120496800	Flanking Active TSS	Brain Angular Gyrus	brain
33	chr7:120496600-120496800	Flanking Active TSS	Brain Hippocampus Middle	brain
34	chr7:120496600-120496800	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
35	chr7:120496600-120496800	Active TSS	Brain Substantia Nigra	brain
36	chr7:120496600-120496800	Flanking Active TSS	Colonic Mucosa	Colon
37	chr7:120496600-120496800	Flanking Active TSS	Fetal Muscle Trunk	muscle
38	chr7:120496600-120496800	Enhancers	Placenta	Placenta
39	chr7:120496600-120496800	Flanking Bivalent TSS/Enh	Fetal Stomach	stomach
40	chr7:120496600-120496800	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
41	chr7:120496600-120496800	Flanking Active TSS	Right Atrium	heart
42	chr7:120496600-120496800	Bivalent Enhancer	Small Intestine	intestine
43	chr7:120496600-120496800	Enhancers	K562	blood
44	chr7:120496600-120496800	Bivalent Enhancer	NHLF	lung
45	chr7:120496600-120497000	Flanking Active TSS	H1 Cell Line	embryonic stem cell
46	chr7:120496600-120497000	Flanking Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
47	chr7:120496600-120497000	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
48	chr7:120496600-120497000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
49	chr7:120496600-120497000	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
50	chr7:120496600-120497000	Bivalent Enhancer	Primary B cells from peripheral blood	blood

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