The 2.0 version of rSNPBase

Variant report

Variant rs183461158
Chromosome Location chr13:30354407-30354408
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30330600-30355000 Weak transcription Rectal Smooth Muscle rectum
2 chr13:30333200-30360200 Weak transcription Pancreas Pancrea
3 chr13:30333200-30368200 Weak transcription Aorta Aorta
4 chr13:30333400-30357000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr13:30333600-30376200 Weak transcription Primary hematopoietic stem cells blood
6 chr13:30335200-30356800 Weak transcription GM12878-XiMat blood
7 chr13:30336400-30357000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr13:30337600-30363000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr13:30337800-30359800 Weak transcription HMEC breast
10 chr13:30338400-30360000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr13:30338400-30360000 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr13:30338600-30357000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr13:30339000-30360200 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr13:30339000-30364200 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr13:30341200-30373200 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr13:30341400-30360200 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr13:30341600-30356800 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr13:30341600-30357200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr13:30341600-30360200 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr13:30341800-30359800 Weak transcription Duodenum Mucosa Duodenum
21 chr13:30341800-30360200 Weak transcription Left Ventricle heart
22 chr13:30341800-30360400 Weak transcription Fetal Adrenal Gland Adrenal Gland
23 chr13:30341800-30363600 Weak transcription HSMM muscle
24 chr13:30341800-30365000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr13:30342000-30356800 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr13:30342000-30357000 Weak transcription NHDF-Ad bronchial
27 chr13:30342000-30359800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr13:30343400-30356600 Weak transcription Liver Liver
29 chr13:30343800-30360200 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr13:30344000-30357000 Weak transcription Osteobl bone
31 chr13:30344400-30359600 Weak transcription Primary T cells from cord blood blood
32 chr13:30344400-30360200 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr13:30345800-30360200 Weak transcription Small Intestine intestine
34 chr13:30346600-30359800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr13:30347600-30361800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr13:30347800-30361400 Weak transcription A549 lung
37 chr13:30349200-30360200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr13:30349800-30364400 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr13:30350000-30360000 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr13:30350200-30357600 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr13:30350200-30358200 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr13:30350200-30361800 Weak transcription Fetal Lung lung
43 chr13:30350400-30359800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr13:30350400-30361800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
45 chr13:30350800-30356800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr13:30350800-30359800 Weak transcription Fetal Intestine Small intestine
47 chr13:30351200-30360200 Weak transcription Placenta Amnion Placenta Amnion
48 chr13:30353400-30361600 Weak transcription Brain Hippocampus Middle brain
49 chr13:30354200-30354600 Weak transcription Colon Smooth Muscle Colon
50 chr13:30354200-30355200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015