Variant report

Variant	rs183540351
Chromosome Location	chr7:65902044-65902045
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532124	chr7:65371521-66234730	Enhancers Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	125 gene(s)	inside rSNPs	diseases
2	nsv1026559	chr7:65617368-66370805	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	116 gene(s)	inside rSNPs	diseases
3	nsv1035107	chr7:65814901-66114919	Genic enhancers Strong transcription ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
4	nsv538909	chr7:65814901-66114919	Strong transcription Weak transcription Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
5	nsv888326	chr7:65825257-66066999	Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
6	nsv482441	chr7:65885824-66061788	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
7	esv1802195	chr7:65886451-65945211	Strong transcription Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
8	nsv1027068	chr7:65901543-65991211	Enhancers Strong transcription Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
9	nsv966832	chr7:65901934-65916028	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:60 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:65879000-65905600	Weak transcription	Lung	lung
2	chr7:65879000-65909000	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr7:65879000-65922200	Weak transcription	Small Intestine	intestine
4	chr7:65879200-65904000	Weak transcription	Fetal Lung	lung
5	chr7:65879200-65907400	Weak transcription	Esophagus	oesophagus
6	chr7:65879200-65924600	Weak transcription	Brain Anterior Caudate	brain
7	chr7:65879200-65939800	Weak transcription	Duodenum Smooth Muscle	Duodenum
8	chr7:65879200-65946000	Weak transcription	NHEK	skin
9	chr7:65879200-65957600	Weak transcription	Psoas Muscle	Psoas
10	chr7:65879400-65909200	Weak transcription	Primary hematopoietic stem cells	blood
11	chr7:65879400-65914200	Weak transcription	Left Ventricle	heart
12	chr7:65879400-65914200	Weak transcription	GM12878-XiMat	blood
13	chr7:65879400-65917200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr7:65879400-65921000	Weak transcription	HUES6 Cell Line	embryonic stem cell
15	chr7:65879400-65921400	Weak transcription	Fetal Kidney	kidney
16	chr7:65879600-65907600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
17	chr7:65879600-65913600	Weak transcription	Primary B cells from peripheral blood	blood
18	chr7:65879600-65919000	Weak transcription	Primary T helper cells PMA-I stimulated	--
19	chr7:65879600-65920400	Weak transcription	Primary B cells from cord blood	blood
20	chr7:65879800-65913600	Weak transcription	Fetal Muscle Trunk	muscle
21	chr7:65884000-65919600	Weak transcription	Monocytes-CD14+_RO01746	blood
22	chr7:65885000-65904200	Weak transcription	K562	blood
23	chr7:65886000-65913600	Weak transcription	Primary T cells fromperipheralblood	blood
24	chr7:65886600-65920400	Weak transcription	Right Ventricle	heart
25	chr7:65887000-65924600	Weak transcription	Brain Cingulate Gyrus	brain
26	chr7:65887000-65924600	Weak transcription	Brain Hippocampus Middle	brain
27	chr7:65887200-65904600	Weak transcription	HUES48 Cell Line	embryonic stem cell
28	chr7:65889200-65903000	Weak transcription	Thymus	Thymus
29	chr7:65889200-65939600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
30	chr7:65889600-65913800	Weak transcription	Primary T helper cells fromperipheralblood	blood
31	chr7:65890000-65928800	Weak transcription	Adipose Nuclei	Adipose
32	chr7:65890200-65907400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
33	chr7:65890400-65916200	Weak transcription	Fetal Thymus	thymus
34	chr7:65891600-65939000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
35	chr7:65892000-65931800	Weak transcription	Ovary	ovary
36	chr7:65893200-65913400	Weak transcription	Skeletal Muscle Female	skeletal muscle
37	chr7:65894200-65905400	Weak transcription	Gastric	stomach
38	chr7:65894200-65939200	Weak transcription	Skeletal Muscle Male	skeletal muscle
39	chr7:65894600-65905200	Weak transcription	Pancreas	Pancrea
40	chr7:65894800-65914000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
41	chr7:65895200-65902600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
42	chr7:65895200-65904000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
43	chr7:65895200-65904200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
44	chr7:65895200-65904200	Weak transcription	Duodenum Mucosa	Duodenum
45	chr7:65895200-65913400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
46	chr7:65895400-65902600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
47	chr7:65895400-65904200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
48	chr7:65895400-65907400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
49	chr7:65895600-65904000	Weak transcription	Fetal Intestine Small	intestine
50	chr7:65895800-65905200	Weak transcription	Fetal Intestine Large	intestine

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