Variant report

Variant	rs183543669
Chromosome Location	chr8:130503530-130503531
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1839602	chr8:130503150-130510068	Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription	TF binding region miRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130497200-130504200	Weak transcription	Thymus	Thymus
2	chr8:130497600-130503600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr8:130502400-130503600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr8:130502400-130504600	Enhancers	HMEC	breast
5	chr8:130502600-130503600	Enhancers	NH-A	brain
6	chr8:130502600-130504200	Enhancers	NHEK	skin
7	chr8:130502600-130504400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr8:130502800-130503600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr8:130502800-130504400	Genic enhancers	K562	blood
10	chr8:130503200-130504400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr8:130503400-130503800	Strong transcription	Dnd41	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links