Variant report

Variant	rs183597398
Chromosome Location	chr5:36453123-36453124
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv597817	chr5:36433782-36460075	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv597818	chr5:36440940-36460462	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv597819	chr5:36445458-36472990	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv1023545	chr5:36448895-36461331	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv1016667	chr5:36448895-36464362	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv2763449	chr5:36448895-36464374	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv597820	chr5:36452065-36463088	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv517187	chr5:36452471-36460462	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:36445800-36462800	Weak transcription	Esophagus	oesophagus
2	chr5:36448000-36453800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr5:36449800-36453800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr5:36450200-36453600	Enhancers	Hela-S3	cervix
5	chr5:36450600-36456800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr5:36451800-36457600	Weak transcription	HSMMtube	muscle
7	chr5:36452000-36453600	Enhancers	Cortex derived primary cultured neurospheres	brain
8	chr5:36452000-36457400	Weak transcription	Osteobl	bone
9	chr5:36452200-36453200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr5:36452400-36453200	Enhancers	ES-I3 Cell Line	embryonic stem cell
11	chr5:36452400-36453200	Enhancers	HUES6 Cell Line	embryonic stem cell
12	chr5:36452400-36453200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr5:36452400-36453400	Enhancers	Placenta	Placenta
14	chr5:36452600-36453200	Enhancers	HUES48 Cell Line	embryonic stem cell
15	chr5:36452600-36453200	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr5:36452600-36453800	Enhancers	Breast Myoepithelial Primary Cells	Breast
17	chr5:36452600-36453800	Flanking Active TSS	NHEK	skin
18	chr5:36452800-36453200	Enhancers	HUES64 Cell Line	embryonic stem cell
19	chr5:36452800-36453200	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr5:36452800-36453200	Flanking Active TSS	HMEC	breast
21	chr5:36452800-36456800	Weak transcription	HSMM	muscle

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