The 2.0 version of rSNPBase

Variant report

Variant rs183603136
Chromosome Location chr20:16559950-16559951
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:16556000-16560200 Weak transcription Small Intestine intestine
2 chr20:16556200-16560000 Weak transcription Stomach Mucosa stomach
3 chr20:16556200-16560400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr20:16556400-16560000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr20:16556400-16560000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr20:16556400-16560000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr20:16556400-16560000 Weak transcription Fetal Kidney kidney
8 chr20:16556400-16560000 Weak transcription HMEC breast
9 chr20:16556400-16560200 Weak transcription HSMMtube muscle
10 chr20:16556400-16560200 Weak transcription NH-A brain
11 chr20:16556400-16560800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr20:16556400-16560800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr20:16556400-16561000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr20:16556400-16562400 Weak transcription Left Ventricle heart
15 chr20:16556600-16560000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr20:16556600-16560000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr20:16556600-16560000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr20:16556600-16560000 Weak transcription Osteobl bone
19 chr20:16556600-16560200 Weak transcription iPS-20b Cell Line embryonic stem cell
20 chr20:16556600-16560200 Weak transcription Fetal Lung lung
21 chr20:16556600-16560200 Weak transcription NHLF lung
22 chr20:16556600-16560400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr20:16556600-16560600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr20:16556600-16560600 Weak transcription HUES48 Cell Line embryonic stem cell
25 chr20:16556600-16560600 Weak transcription HUES64 Cell Line embryonic stem cell
26 chr20:16556600-16560800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr20:16556600-16560800 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr20:16556600-16560800 Weak transcription Adipose Nuclei Adipose
29 chr20:16556600-16560800 Weak transcription Colon Smooth Muscle Colon
30 chr20:16556600-16560800 Weak transcription Stomach Smooth Muscle stomach
31 chr20:16556600-16561000 Weak transcription Colonic Mucosa Colon
32 chr20:16556800-16560000 Weak transcription NHEK skin
33 chr20:16556800-16560200 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr20:16556800-16560800 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr20:16556800-16560800 Weak transcription Fetal Brain Female brain
36 chr20:16556800-16560800 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr20:16557000-16560000 Weak transcription Placenta Amnion Placenta Amnion
38 chr20:16557000-16560000 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr20:16557000-16560200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr20:16557000-16560200 Weak transcription iPS-15b Cell Line embryonic stem cell
41 chr20:16557000-16560600 Weak transcription A549 lung
42 chr20:16557000-16561000 Weak transcription Fetal Muscle Leg muscle
43 chr20:16557200-16560200 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr20:16557200-16560600 Weak transcription HepG2 liver
45 chr20:16559400-16560400 Enhancers Pancreas Pancrea
46 chr20:16559400-16562000 Enhancers Fetal Intestine Large intestine
47 chr20:16559600-16560400 Enhancers Esophagus oesophagus
48 chr20:16559600-16560400 Enhancers Gastric stomach
49 chr20:16559600-16560400 Enhancers Lung lung
50 chr20:16559600-16561200 Enhancers Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015