Variant report

Variant	rs183690978
Chromosome Location	chr8:103974787-103974788
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:103874782..103876316-chr8:103973931..103975682,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000155096	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv33118	chr8:103358567-104068172	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	145 gene(s)	inside rSNPs	diseases
2	nsv465752	chr8:103953990-103979714	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv611823	chr8:103953990-103979714	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	esv1803798	chr8:103974458-103987922	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:103973200-103975200	Enhancers	Breast Myoepithelial Primary Cells	Breast
2	chr8:103973400-103974800	Enhancers	Thymus	Thymus
3	chr8:103973400-103974800	Enhancers	GM12878-XiMat	blood
4	chr8:103973400-103975000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr8:103973600-103974800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr8:103973600-103974800	Enhancers	Fetal Kidney	kidney
7	chr8:103973600-103975000	Enhancers	Brain Cingulate Gyrus	brain
8	chr8:103973600-103975400	Enhancers	Fetal Thymus	thymus
9	chr8:103973800-103974800	Enhancers	HUES48 Cell Line	embryonic stem cell
10	chr8:103973800-103974800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr8:103974000-103978000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
12	chr8:103974200-103974800	Enhancers	Sigmoid Colon	Sigmoid Colon
13	chr8:103974200-103977600	Weak transcription	Adipose Nuclei	Adipose
14	chr8:103974200-103977800	Weak transcription	Primary monocytes fromperipheralblood	blood
15	chr8:103974200-103977800	Weak transcription	Brain Anterior Caudate	brain
16	chr8:103974200-103979800	Weak transcription	Fetal Muscle Leg	muscle
17	chr8:103974400-103976000	Weak transcription	HUES6 Cell Line	embryonic stem cell
18	chr8:103974400-103976000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
19	chr8:103974400-103976000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
20	chr8:103974400-103976000	Weak transcription	Placenta	Placenta
21	chr8:103974400-103976000	Weak transcription	Ovary	ovary
22	chr8:103974400-103976000	Weak transcription	Pancreas	Pancrea
23	chr8:103974400-103976200	Weak transcription	H1 Cell Line	embryonic stem cell
24	chr8:103974400-103976400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
25	chr8:103974400-103977800	Weak transcription	Monocytes-CD14+_RO01746	blood
26	chr8:103974400-103979400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
27	chr8:103974400-103980400	Weak transcription	Brain Inferior Temporal Lobe	brain
28	chr8:103974400-103980800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
29	chr8:103974400-103989200	Weak transcription	H9 Cell Line	embryonic stem cell
30	chr8:103974400-103989200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
31	chr8:103974600-103976000	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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