Variant report

Variant	rs183779402
Chromosome Location	chr7:83506227-83506228
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv607707	chr7:83381032-83646816	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv1017260	chr7:83393101-83506643	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv888619	chr7:83452312-83549032	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv888620	chr7:83459908-83593805	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv607708	chr7:83495880-83526743	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
6	nsv607709	chr7:83495880-83533954	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
7	nsv470355	chr7:83505391-83533954	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:83505400-83506400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr7:83505400-83506800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr7:83505600-83506400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr7:83505800-83506600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr7:83505800-83506600	Enhancers	HMEC	breast
6	chr7:83505800-83506600	Enhancers	NHDF-Ad	bronchial
7	chr7:83505800-83506600	Enhancers	NHEK	skin
8	chr7:83506000-83506400	Enhancers	HUES48 Cell Line	embryonic stem cell
9	chr7:83506000-83506400	Enhancers	iPS-15b Cell Line	embryonic stem cell
10	chr7:83506000-83506600	Enhancers	ES-I3 Cell Line	embryonic stem cell
11	chr7:83506000-83506600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr7:83506000-83506600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr7:83506200-83506600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr7:83506200-83506600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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