The 2.0 version of rSNPBase

Variant report

Variant rs183891209
Chromosome Location chr1:155188856-155188857
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:155179600-155189000 Weak transcription Stomach Mucosa stomach
2 chr1:155179600-155189200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:155179600-155189200 Weak transcription Colonic Mucosa Colon
4 chr1:155179600-155189200 Weak transcription Psoas Muscle Psoas
5 chr1:155179600-155195400 Weak transcription Aorta Aorta
6 chr1:155179600-155195800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr1:155179600-155196200 Weak transcription Pancreas Pancrea
8 chr1:155179600-155196600 Weak transcription Gastric stomach
9 chr1:155179600-155196600 Weak transcription Small Intestine intestine
10 chr1:155179800-155189000 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr1:155179800-155193800 Weak transcription HSMMtube muscle
12 chr1:155180000-155189200 Weak transcription Muscle Satellite Cultured Cells --
13 chr1:155180000-155194000 Weak transcription HUVEC blood vessel
14 chr1:155180000-155195600 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr1:155180200-155194000 Weak transcription HSMM muscle
16 chr1:155180600-155189000 Weak transcription GM12878-XiMat blood
17 chr1:155180600-155189600 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr1:155180600-155195600 Weak transcription HepG2 liver
19 chr1:155180800-155189000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr1:155181000-155189000 Weak transcription Fetal Lung lung
21 chr1:155182200-155189200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr1:155182200-155195800 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr1:155182200-155196400 Weak transcription Esophagus oesophagus
24 chr1:155182200-155196600 Weak transcription Lung lung
25 chr1:155182400-155189200 Weak transcription Right Ventricle heart
26 chr1:155182600-155196200 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr1:155182800-155194800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
28 chr1:155182800-155194800 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr1:155182800-155196400 Weak transcription Left Ventricle heart
30 chr1:155185600-155189000 Enhancers Primary neutrophils fromperipheralblood blood
31 chr1:155185600-155189000 Weak transcription Primary T cells fromperipheralblood blood
32 chr1:155185800-155189000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr1:155185800-155189000 Weak transcription Brain Germinal Matrix brain
34 chr1:155185800-155189200 Weak transcription Primary B cells from cord blood blood
35 chr1:155185800-155189400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr1:155186000-155189000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr1:155186000-155195200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr1:155186200-155189200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr1:155186600-155189200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr1:155186600-155189200 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr1:155186600-155189200 Weak transcription Primary T cells from cord blood blood
42 chr1:155186600-155193000 Weak transcription A549 lung
43 chr1:155186800-155193600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr1:155186800-155193600 Weak transcription Fetal Muscle Leg muscle
45 chr1:155186800-155193600 Weak transcription Thymus Thymus
46 chr1:155187800-155189000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr1:155187800-155189200 Weak transcription Fetal Thymus thymus
48 chr1:155187800-155190800 Enhancers Primary Natural Killer cells fromperipheralblood blood
49 chr1:155187800-155196000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr1:155188000-155189000 Weak transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015