Variant report

Variant rs1839920
Chromosome Location chr2:97865829-97865830
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:97779800-97877200 Weak transcription Rectal Smooth Muscle rectum
2 chr2:97780000-97884600 Weak transcription Fetal Stomach stomach
3 chr2:97808000-97867400 Weak transcription Fetal Kidney kidney
4 chr2:97816200-97881400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr2:97833400-97882800 Weak transcription Psoas Muscle Psoas
6 chr2:97834600-97883000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr2:97835200-97866200 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr2:97836000-97866400 Weak transcription Primary B cells from cord blood blood
9 chr2:97841800-97867200 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr2:97844600-97879400 Weak transcription Brain Germinal Matrix brain
11 chr2:97846000-97889600 Weak transcription NHLF lung
12 chr2:97847200-97883000 Weak transcription Placenta Placenta
13 chr2:97848000-97884800 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr2:97848000-97884800 Weak transcription Right Ventricle heart
15 chr2:97848000-97886200 Weak transcription H1 Cell Line embryonic stem cell
16 chr2:97849600-97877200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr2:97849800-97879000 Weak transcription Fetal Intestine Small intestine
18 chr2:97850200-97898800 Weak transcription Small Intestine intestine
19 chr2:97853600-97876200 Weak transcription Lung lung
20 chr2:97855000-97868600 Strong transcription Fetal Thymus thymus
21 chr2:97855400-97869400 Weak transcription Gastric stomach
22 chr2:97855600-97871400 Weak transcription H9 Cell Line embryonic stem cell
23 chr2:97855600-97897000 Weak transcription Spleen Spleen
24 chr2:97856000-97871200 Weak transcription HSMMtube muscle
25 chr2:97856200-97866200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr2:97856200-97869800 Strong transcription Dnd41 blood
27 chr2:97856200-97873200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr2:97856400-97868600 Weak transcription ES-WA7 Cell Line embryonic stem cell
29 chr2:97856600-97866800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
30 chr2:97856800-97869000 Strong transcription Stomach Smooth Muscle stomach
31 chr2:97856800-97870000 Strong transcription Primary T helper cells fromperipheralblood blood
32 chr2:97857600-97884600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr2:97858600-97877200 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr2:97858600-97877400 Weak transcription Ovary ovary
35 chr2:97858600-97877400 Weak transcription K562 blood
36 chr2:97858600-97878600 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr2:97859600-97868800 Strong transcription Duodenum Mucosa Duodenum
38 chr2:97859600-97869800 Strong transcription Primary T regulatory cells fromperipheralblood blood
39 chr2:97859800-97869200 Strong transcription Fetal Muscle Trunk muscle
40 chr2:97860000-97869800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr2:97860000-97876800 Weak transcription Primary T helper naive cells from peripheral blood blood
42 chr2:97860400-97866000 Weak transcription Primary B cells from peripheral blood blood
43 chr2:97860400-97880200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr2:97860600-97870000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr2:97861000-97877200 Weak transcription NH-A brain
46 chr2:97861000-97877400 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr2:97861000-97878400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr2:97861400-97869800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr2:97861800-97867200 Strong transcription Brain Substantia Nigra brain
50 chr2:97861800-97868000 Strong transcription Adipose Nuclei Adipose

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