Variant report

Variant	rs184125656
Chromosome Location	chr14:34981089-34981090
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:34980447..34984280-chr14:35015816..35019856,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000206596	Chromatin interaction

Extended variants
information (count: 16 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:16 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1040980	chr14:34345018-35255592	Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	109 gene(s)	inside rSNPs	diseases
2	nsv1051104	chr14:34592378-35007083	Flanking Bivalent TSS/Enh Enhancers Weak transcription Strong transcription Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
3	nsv949738	chr14:34616331-34990688	Strong transcription Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
4	nsv564192	chr14:34725233-34996507	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
5	nsv564193	chr14:34728127-35000188	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
6	nsv528989	chr14:34744426-34998705	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
7	nsv1054949	chr14:34834260-34992049	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
8	nsv542025	chr14:34834260-34992049	Strong transcription Enhancers Weak transcription Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
9	nsv901600	chr14:34895977-35010041	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
10	nsv1037857	chr14:34943388-35007724	Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	8 gene(s)	inside rSNPs	diseases
11	nsv542026	chr14:34943388-35007724	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	8 gene(s)	inside rSNPs	diseases
12	nsv1048408	chr14:34958352-35255592	Weak transcription Strong transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
13	nsv1049048	chr14:34969406-35048672	Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
14	nsv1042294	chr14:34974774-35017859	Genic enhancers Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
15	nsv1053274	chr14:34980184-35020973	Weak transcription Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
16	nsv1037503	chr14:34980184-35027115	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	48 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:43 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:34966400-34985400	Weak transcription	Primary B cells from cord blood	blood
2	chr14:34967000-34985200	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr14:34967000-34985200	Weak transcription	Fetal Lung	lung
4	chr14:34967600-34985200	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr14:34967800-34984800	Weak transcription	Fetal Stomach	stomach
6	chr14:34968400-34984800	Weak transcription	Sigmoid Colon	Sigmoid Colon
7	chr14:34971000-34986000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr14:34971800-34985000	Weak transcription	Duodenum Smooth Muscle	Duodenum
9	chr14:34972200-34984400	Weak transcription	Fetal Muscle Leg	muscle
10	chr14:34972200-34984800	Weak transcription	Ovary	ovary
11	chr14:34972200-34989800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
12	chr14:34972600-34985000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr14:34972800-34984800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr14:34972800-34985000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr14:34972800-34986000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr14:34974600-34985000	Weak transcription	Primary B cells from peripheral blood	blood
17	chr14:34975600-34985000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr14:34975600-34988000	Weak transcription	A549	lung
19	chr14:34975600-34988200	Weak transcription	Gastric	stomach
20	chr14:34975600-34989800	Weak transcription	Pancreas	Pancrea
21	chr14:34976000-34985000	Weak transcription	Duodenum Mucosa	Duodenum
22	chr14:34976200-34984400	Weak transcription	Fetal Intestine Small	intestine
23	chr14:34976200-34984800	Weak transcription	Rectal Mucosa Donor 29	rectum
24	chr14:34976800-34984800	Weak transcription	HUES48 Cell Line	embryonic stem cell
25	chr14:34976800-34984800	Weak transcription	Fetal Intestine Large	intestine
26	chr14:34977000-34984800	Weak transcription	Rectal Mucosa Donor 31	rectum
27	chr14:34977400-34985000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
28	chr14:34977400-34985000	Weak transcription	HepG2	liver
29	chr14:34978600-34985200	Weak transcription	HUES64 Cell Line	embryonic stem cell
30	chr14:34978800-34985200	Weak transcription	HUES6 Cell Line	embryonic stem cell
31	chr14:34979000-34985000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
32	chr14:34979200-34985400	Weak transcription	Osteobl	bone
33	chr14:34979600-34989600	Weak transcription	Psoas Muscle	Psoas
34	chr14:34979800-34985200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
35	chr14:34979800-34985200	Weak transcription	Brain Cingulate Gyrus	brain
36	chr14:34980000-34987200	Weak transcription	NH-A	brain
37	chr14:34980000-34990200	Weak transcription	Muscle Satellite Cultured Cells	--
38	chr14:34980400-34985400	Weak transcription	Thymus	Thymus
39	chr14:34980600-34991200	Weak transcription	Fetal Kidney	kidney
40	chr14:34980600-34993800	Weak transcription	K562	blood
41	chr14:34980800-34984800	Weak transcription	Adipose Nuclei	Adipose
42	chr14:34980800-34985000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
43	chr14:34980800-34987200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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