The 2.0 version of rSNPBase

Variant report

Variant rs184219769
Chromosome Location chr5:118692081-118692082
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:118671200-118695400 Weak transcription A549 lung
2 chr5:118682600-118693600 Weak transcription Dnd41 blood
3 chr5:118684000-118692800 Weak transcription K562 blood
4 chr5:118690400-118692600 Flanking Active TSS Primary T cells from cord blood blood
5 chr5:118690600-118692400 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
6 chr5:118690600-118693200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
7 chr5:118690600-118693400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
8 chr5:118690600-118700400 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
9 chr5:118690800-118692200 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
10 chr5:118690800-118692200 Flanking Active TSS Thymus Thymus
11 chr5:118690800-118692400 Active TSS ES-I3 Cell Line embryonic stem cell
12 chr5:118690800-118692400 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
13 chr5:118690800-118692400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr5:118690800-118693800 Active TSS Rectal Smooth Muscle rectum
15 chr5:118691000-118692200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr5:118691000-118692200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
17 chr5:118691000-118692200 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
18 chr5:118691000-118692400 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
19 chr5:118691000-118692400 Active TSS Esophagus oesophagus
20 chr5:118691000-118692600 Active TSS H9 Cell Line embryonic stem cell
21 chr5:118691000-118692600 Flanking Active TSS Primary hematopoietic stem cells blood
22 chr5:118691000-118692600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr5:118691000-118692600 Flanking Active TSS HUVEC blood vessel
24 chr5:118691000-118692600 Active TSS Osteobl bone
25 chr5:118691000-118693000 Bivalent/Poised TSS Psoas Muscle Psoas
26 chr5:118691000-118693000 Active TSS Right Ventricle heart
27 chr5:118691000-118693400 Active TSS HSMMtube muscle
28 chr5:118691200-118692200 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
29 chr5:118691200-118692200 Bivalent/Poised TSS Brain Germinal Matrix brain
30 chr5:118691200-118692200 Active TSS Small Intestine intestine
31 chr5:118691200-118692400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
32 chr5:118691200-118692400 Active TSS Brain Anterior Caudate brain
33 chr5:118691200-118692400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
34 chr5:118691200-118692400 Active TSS Fetal Stomach stomach
35 chr5:118691200-118692600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
36 chr5:118691200-118692600 Active TSS Brain Angular Gyrus brain
37 chr5:118691200-118692600 Active TSS Brain Substantia Nigra brain
38 chr5:118691200-118692600 Active TSS Fetal Kidney kidney
39 chr5:118691200-118692600 Active TSS Ovary ovary
40 chr5:118691200-118692600 Active TSS HSMM muscle
41 chr5:118691200-118692800 Active TSS Aorta Aorta
42 chr5:118691200-118693000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
43 chr5:118691200-118693000 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
44 chr5:118691200-118693000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
45 chr5:118691200-118693000 Bivalent/Poised TSS Fetal Intestine Small intestine
46 chr5:118691200-118693000 Active TSS Fetal Muscle Trunk muscle
47 chr5:118691200-118693200 Active TSS Left Ventricle heart
48 chr5:118691200-118693200 Active TSS Right Atrium heart
49 chr5:118691200-118693400 Active TSS Pancreatic Islets Pancreatic Islet
50 chr5:118691200-118694200 Active TSS Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015