Variant report

Variant	rs184290379
Chromosome Location	chr1:63191493-63191494
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:63186584..63188950-chr1:63191033..63193333,2	K562	blood:

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3433680	chr1:63191427-63191627	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:62 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:63187200-63191800	Weak transcription	K562	blood
2	chr1:63187200-63195200	Weak transcription	Fetal Stomach	stomach
3	chr1:63187400-63198000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr1:63188200-63191600	Weak transcription	Fetal Intestine Large	intestine
5	chr1:63188600-63194200	Enhancers	Cortex derived primary cultured neurospheres	brain
6	chr1:63189800-63192000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr1:63189800-63192000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr1:63189800-63192000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr1:63189800-63192000	Enhancers	Adipose Nuclei	Adipose
10	chr1:63189800-63192000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
11	chr1:63189800-63192400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr1:63189800-63193800	Enhancers	Rectal Mucosa Donor 31	rectum
13	chr1:63190000-63192000	Enhancers	Breast Myoepithelial Primary Cells	Breast
14	chr1:63190000-63192000	Enhancers	Brain Hippocampus Middle	brain
15	chr1:63190000-63192000	Enhancers	Colonic Mucosa	Colon
16	chr1:63190000-63192000	Enhancers	Colon Smooth Muscle	Colon
17	chr1:63190000-63192000	Enhancers	Sigmoid Colon	Sigmoid Colon
18	chr1:63190200-63192000	Enhancers	Stomach Mucosa	stomach
19	chr1:63190200-63192200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
20	chr1:63190200-63192200	Enhancers	iPS-20b Cell Line	embryonic stem cell
21	chr1:63190200-63195800	Weak transcription	Brain Cingulate Gyrus	brain
22	chr1:63190400-63192000	Enhancers	iPS-18 Cell Line	embryonic stem cell
23	chr1:63190400-63192000	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
24	chr1:63190400-63193600	Enhancers	Rectal Mucosa Donor 29	rectum
25	chr1:63190400-63194800	Weak transcription	Brain Angular Gyrus	brain
26	chr1:63190600-63191800	Enhancers	HUES48 Cell Line	embryonic stem cell
27	chr1:63190600-63191800	Enhancers	Small Intestine	intestine
28	chr1:63190600-63192000	Enhancers	ES-I3 Cell Line	embryonic stem cell
29	chr1:63190600-63192000	Enhancers	Primary hematopoietic stem cells short term culture	blood
30	chr1:63190600-63192400	Enhancers	Muscle Satellite Cultured Cells	--
31	chr1:63190800-63191600	Enhancers	Duodenum Smooth Muscle	Duodenum
32	chr1:63190800-63192000	Enhancers	HUES64 Cell Line	embryonic stem cell
33	chr1:63190800-63192000	Enhancers	iPS-15b Cell Line	embryonic stem cell
34	chr1:63190800-63192000	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
35	chr1:63191000-63191600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
36	chr1:63191000-63191600	Enhancers	Primary hematopoietic stem cells	blood
37	chr1:63191000-63191600	Weak transcription	Brain Substantia Nigra	brain
38	chr1:63191000-63191800	Enhancers	Fetal Intestine Small	intestine
39	chr1:63191000-63192000	Enhancers	HUES6 Cell Line	embryonic stem cell
40	chr1:63191000-63192000	Enhancers	Liver	Liver
41	chr1:63191000-63192200	Enhancers	HepG2	liver
42	chr1:63191200-63191600	Weak transcription	Stomach Smooth Muscle	stomach
43	chr1:63191200-63191800	Enhancers	Duodenum Mucosa	Duodenum
44	chr1:63191200-63191800	Flanking Active TSS	Osteobl	bone
45	chr1:63191200-63192000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
46	chr1:63191200-63192000	Enhancers	Brain Anterior Caudate	brain
47	chr1:63191200-63193400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
48	chr1:63191200-63194600	Weak transcription	Primary monocytes fromperipheralblood	blood
49	chr1:63191200-63194800	Weak transcription	Monocytes-CD14+_RO01746	blood
50	chr1:63191400-63191600	Weak transcription	Right Atrium	heart

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