Variant report

Variant	rs184297212
Chromosome Location	chr11:92895559-92895560
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1039134	chr11:92790000-93219942	Strong transcription Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
2	nsv898176	chr11:92877533-92965312	Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	nsv898177	chr11:92877533-92971874	Strong transcription Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
4	nsv898178	chr11:92881933-92949447	Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
5	nsv898179	chr11:92881933-92956873	Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
6	nsv1047828	chr11:92886648-92915055	ZNF genes & repeats Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
7	nsv1045544	chr11:92889187-92915055	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
8	nsv1041794	chr11:92893654-92915055	ZNF genes & repeats Strong transcription Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:103 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:92867200-92896400	Weak transcription	Primary B cells from peripheral blood	blood
2	chr11:92868400-92914600	Weak transcription	Brain Substantia Nigra	brain
3	chr11:92875400-92910400	Weak transcription	Brain Cingulate Gyrus	brain
4	chr11:92876400-92896600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr11:92876600-92900400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
6	chr11:92876600-92910600	Weak transcription	Sigmoid Colon	Sigmoid Colon
7	chr11:92876800-92910600	Weak transcription	Lung	lung
8	chr11:92877000-92911400	Weak transcription	Osteobl	bone
9	chr11:92877800-92899600	Weak transcription	NHLF	lung
10	chr11:92877800-92915000	Weak transcription	Muscle Satellite Cultured Cells	--
11	chr11:92878400-92910600	Weak transcription	Placenta Amnion	Placenta Amnion
12	chr11:92878800-92895800	Weak transcription	Brain Germinal Matrix	brain
13	chr11:92878800-92896000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
14	chr11:92879000-92896600	Weak transcription	Ovary	ovary
15	chr11:92879000-92900200	Weak transcription	Fetal Muscle Leg	muscle
16	chr11:92879000-92910800	Weak transcription	HSMMtube	muscle
17	chr11:92879200-92896600	Weak transcription	Fetal Brain Female	brain
18	chr11:92879600-92910000	Weak transcription	Fetal Brain Male	brain
19	chr11:92879600-92910800	Weak transcription	HMEC	breast
20	chr11:92880400-92895800	Weak transcription	Brain Angular Gyrus	brain
21	chr11:92881200-92899200	Weak transcription	NH-A	brain
22	chr11:92882000-92910600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr11:92884600-92897000	Weak transcription	Brain Hippocampus Middle	brain
24	chr11:92885000-92896400	Weak transcription	Primary T helper cells PMA-I stimulated	--
25	chr11:92885000-92897200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
26	chr11:92885200-92896600	Weak transcription	HUVEC	blood vessel
27	chr11:92885600-92896400	Weak transcription	Liver	Liver
28	chr11:92885800-92910000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
29	chr11:92886000-92896400	Weak transcription	Rectal Smooth Muscle	rectum
30	chr11:92888000-92900000	Weak transcription	Fetal Kidney	kidney
31	chr11:92888400-92900600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
32	chr11:92889000-92895800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
33	chr11:92889000-92896600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
34	chr11:92889000-92899800	Strong transcription	Monocytes-CD14+_RO01746	blood
35	chr11:92889000-92900200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
36	chr11:92889400-92896600	Weak transcription	Stomach Smooth Muscle	stomach
37	chr11:92889600-92896400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
38	chr11:92889600-92902200	Weak transcription	Fetal Intestine Large	intestine
39	chr11:92889800-92896400	Weak transcription	Rectal Mucosa Donor 31	rectum
40	chr11:92889800-92900200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
41	chr11:92889800-92911200	Weak transcription	Brain Inferior Temporal Lobe	brain
42	chr11:92889800-92913600	Weak transcription	Spleen	Spleen
43	chr11:92890000-92899600	Strong transcription	Primary monocytes fromperipheralblood	blood
44	chr11:92890200-92896400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
45	chr11:92890400-92901400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
46	chr11:92890400-92901800	Strong transcription	HUES64 Cell Line	embryonic stem cell
47	chr11:92890400-92910000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
48	chr11:92890600-92901400	Strong transcription	Dnd41	blood
49	chr11:92890600-92911600	Weak transcription	Colon Smooth Muscle	Colon
50	chr11:92890800-92896400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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