Variant report

Variant	rs184327587
Chromosome Location	chr9:21579852-21579853
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1031432	chr9:21472601-21608774	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	122 gene(s)	inside rSNPs	diseases
2	nsv540085	chr9:21472601-21608774	Weak transcription Enhancers Active TSS Bivalent/Poised TSS Strong transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	122 gene(s)	inside rSNPs	diseases
3	nsv1029634	chr9:21542970-21765286	Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
4	nsv1015623	chr9:21579110-21694039	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:21575800-21592200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr9:21577200-21585800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr9:21578400-21580800	Flanking Active TSS	A549	lung
4	chr9:21579000-21580000	Enhancers	Stomach Mucosa	stomach
5	chr9:21579200-21580800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr9:21579400-21580000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
7	chr9:21579400-21580000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
8	chr9:21579400-21580000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
9	chr9:21579400-21580000	Enhancers	Primary T killer memory cells from peripheral blood	blood
10	chr9:21579400-21580200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr9:21579400-21580600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr9:21579400-21582400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr9:21579400-21583000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
14	chr9:21579400-21590800	Weak transcription	HSMM	muscle
15	chr9:21579600-21580000	Enhancers	Primary T cells from cord blood	blood
16	chr9:21579600-21580000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
17	chr9:21579600-21580000	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
18	chr9:21579600-21580200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
19	chr9:21579600-21580800	Weak transcription	Fetal Intestine Small	intestine
20	chr9:21579600-21580800	Enhancers	Osteobl	bone
21	chr9:21579600-21581600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr9:21579600-21583000	Weak transcription	Muscle Satellite Cultured Cells	--
23	chr9:21579600-21583200	Weak transcription	HMEC	breast
24	chr9:21579600-21589400	Weak transcription	HUVEC	blood vessel
25	chr9:21579800-21580000	Active TSS	NHDF-Ad	bronchial
26	chr9:21579800-21580200	Enhancers	Primary T helper cells PMA-I stimulated	--
27	chr9:21579800-21580400	Enhancers	Hela-S3	cervix
28	chr9:21579800-21582400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr9:21579800-21582400	Weak transcription	NHLF	lung
30	chr9:21579800-21583000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
31	chr9:21579800-21583200	Weak transcription	NHEK	skin
32	chr9:21579800-21585800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
33	chr9:21579800-21585800	Weak transcription	NH-A	brain

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