Variant report

Variant	rs184383832
Chromosome Location	chr4:8507693-8507694
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr4:8498123..8500167-chr4:8506357..8507950,2	MCF-7	breast:
2	chr4:8506167..8508857-chr4:8582205..8583898,2	MCF-7	breast:
3	chr4:8500499..8503047-chr4:8505239..8508077,2	K562	blood:

Variant related genes	Relation type
ENSG00000155269	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv878604	chr4:8315938-8618916	Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
2	nsv1002680	chr4:8357163-8721214	Active TSS Flanking Active TSS Strong transcription Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
3	nsv4224	chr4:8503727-8546462	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	esv3327752	chr4:8507302-8509800	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:55 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:8501600-8507800	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr4:8501600-8507800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr4:8501600-8507800	Weak transcription	Brain Angular Gyrus	brain
4	chr4:8501800-8510600	Enhancers	Ovary	ovary
5	chr4:8502800-8512800	Enhancers	Placenta	Placenta
6	chr4:8503600-8509400	Enhancers	Right Ventricle	heart
7	chr4:8503600-8509800	Enhancers	Adipose Nuclei	Adipose
8	chr4:8504200-8509000	Bivalent Enhancer	Fetal Muscle Trunk	muscle
9	chr4:8504200-8509400	Enhancers	Right Atrium	heart
10	chr4:8504200-8510600	Enhancers	Breast Myoepithelial Primary Cells	Breast
11	chr4:8504600-8510800	Enhancers	Fetal Muscle Leg	muscle
12	chr4:8504800-8507800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr4:8505000-8508000	Weak transcription	Placenta Amnion	Placenta Amnion
14	chr4:8505200-8507800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr4:8505200-8507800	Weak transcription	Brain Anterior Caudate	brain
16	chr4:8505200-8508000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr4:8505400-8507800	Weak transcription	HSMM	muscle
18	chr4:8505400-8509000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
19	chr4:8505600-8507800	Weak transcription	NHDF-Ad	bronchial
20	chr4:8505800-8507800	Weak transcription	Rectal Smooth Muscle	rectum
21	chr4:8505800-8509600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr4:8505800-8509800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
23	chr4:8506000-8509000	Enhancers	Spleen	Spleen
24	chr4:8506200-8507800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
25	chr4:8506200-8507800	Weak transcription	Colonic Mucosa	Colon
26	chr4:8506200-8508200	Weak transcription	Duodenum Smooth Muscle	Duodenum
27	chr4:8506200-8509600	Enhancers	HSMMtube	muscle
28	chr4:8506400-8507800	Weak transcription	Brain Inferior Temporal Lobe	brain
29	chr4:8506400-8507800	Weak transcription	Brain Substantia Nigra	brain
30	chr4:8506400-8507800	Weak transcription	Left Ventricle	heart
31	chr4:8506400-8508200	Weak transcription	Lung	lung
32	chr4:8506400-8509200	Weak transcription	Rectal Mucosa Donor 31	rectum
33	chr4:8506600-8508200	Weak transcription	Pancreas	Pancrea
34	chr4:8506600-8508600	Weak transcription	Brain Cingulate Gyrus	brain
35	chr4:8506800-8507800	Weak transcription	Brain Hippocampus Middle	brain
36	chr4:8506800-8508200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
37	chr4:8507000-8509200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
38	chr4:8507000-8509800	Enhancers	H1 Cell Line	embryonic stem cell
39	chr4:8507200-8509400	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr4:8507200-8509400	Enhancers	Skeletal Muscle Female	skeletal muscle
41	chr4:8507200-8512000	Weak transcription	Gastric	stomach
42	chr4:8507400-8508200	Enhancers	Stomach Smooth Muscle	stomach
43	chr4:8507400-8509200	Enhancers	Cortex derived primary cultured neurospheres	brain
44	chr4:8507400-8509400	Enhancers	ES-I3 Cell Line	embryonic stem cell
45	chr4:8507400-8509400	Enhancers	iPS-15b Cell Line	embryonic stem cell
46	chr4:8507400-8509400	Enhancers	iPS-20b Cell Line	embryonic stem cell
47	chr4:8507600-8507800	Enhancers	HUES6 Cell Line	embryonic stem cell
48	chr4:8507600-8507800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
49	chr4:8507600-8508200	Enhancers	Fetal Kidney	kidney
50	chr4:8507600-8508800	Enhancers	HUES64 Cell Line	embryonic stem cell

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