Variant report

Variant	rs184410360
Chromosome Location	chrX:110188555-110188556
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817233	chrX:109693720-110244649	Weak transcription Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv432353	chrX:110098562-110188612	Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases
3	nsv933069	chrX:110117241-110257564	Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv532899	chrX:110117241-110419226	Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	nsv428712	chrX:110184832-110358638	Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:42 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:110182600-110188600	Weak transcription	Stomach Mucosa	stomach
2	chrX:110187000-110188600	Bivalent/Poised TSS	Fetal Kidney	kidney
3	chrX:110187000-110188800	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
4	chrX:110187000-110189800	Bivalent/Poised TSS	Fetal Brain Female	brain
5	chrX:110187000-110190200	Active TSS	Brain Germinal Matrix	brain
6	chrX:110187200-110188600	Active TSS	NH-A	brain
7	chrX:110187200-110188800	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
8	chrX:110187200-110188800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
9	chrX:110187200-110189000	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
10	chrX:110187200-110189000	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
11	chrX:110187400-110188600	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell
12	chrX:110187400-110188600	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
13	chrX:110187400-110188600	Active TSS	iPS-20b Cell Line	embryonic stem cell
14	chrX:110187400-110188600	Active TSS	Brain Substantia Nigra	brain
15	chrX:110187400-110188600	Bivalent/Poised TSS	Stomach Smooth Muscle	stomach
16	chrX:110187400-110188800	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
17	chrX:110187400-110188800	Bivalent/Poised TSS	ES-UCSF4 Cell Line	embryonic stem cell
18	chrX:110187400-110188800	Active TSS	Brain Anterior Caudate	brain
19	chrX:110187400-110188800	Active TSS	Brain Cingulate Gyrus	brain
20	chrX:110187400-110188800	Active TSS	Pancreas	Pancrea
21	chrX:110187400-110189000	Active TSS	H9 Cell Line	embryonic stem cell
22	chrX:110187400-110189000	Active TSS	Brain Angular Gyrus	brain
23	chrX:110187600-110188600	Bivalent/Poised TSS	H9 Derived Neuron Cultured Cells	ES cell derived
24	chrX:110187600-110188800	Active TSS	Brain Inferior Temporal Lobe	brain
25	chrX:110187600-110188800	Active TSS	Fetal Brain Male	brain
26	chrX:110187800-110188600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
27	chrX:110187800-110188600	Active TSS	HSMMtube	muscle
28	chrX:110187800-110188800	Bivalent/Poised TSS	HMEC	breast
29	chrX:110188000-110188600	Active TSS	Brain Hippocampus Middle	brain
30	chrX:110188200-110188600	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
31	chrX:110188200-110189000	Flanking Bivalent TSS/Enh	HUES48 Cell Line	embryonic stem cell
32	chrX:110188400-110188600	Flanking Bivalent TSS/Enh	H1 Cell Line	embryonic stem cell
33	chrX:110188400-110188600	Flanking Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chrX:110188400-110188600	Flanking Bivalent TSS/Enh	iPS-15b Cell Line	embryonic stem cell
35	chrX:110188400-110188600	Flanking Bivalent TSS/Enh	iPS DF 6.9 Cell Line	embryonic stem cell
36	chrX:110188400-110188600	Bivalent Enhancer	Breast Myoepithelial Primary Cells	Breast
37	chrX:110188400-110188600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
38	chrX:110188400-110188600	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin02	Skin
39	chrX:110188400-110188600	Enhancers	Esophagus	oesophagus
40	chrX:110188400-110188600	Bivalent Enhancer	Fetal Muscle Trunk	muscle
41	chrX:110188400-110188600	Flanking Active TSS	Gastric	stomach
42	chrX:110188400-110189000	Flanking Bivalent TSS/Enh	iPS-18 Cell Line	embryonic stem cell

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