Variant report

Variant	rs184467
Chromosome Location	chr13:29622636-29622637
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:44)

rs_ID	r²[population]
rs1006810	0.82[ASN][1000 genomes]
rs11620188	0.82[ASN][1000 genomes]
rs12858770	0.95[ASN][1000 genomes]
rs1322383	0.96[ASN][1000 genomes]
rs167833	0.89[ASN][1000 genomes]
rs187333	0.89[ASN][1000 genomes]
rs191265	0.89[ASN][1000 genomes]
rs2146139	0.96[ASN][1000 genomes]
rs2146140	0.96[ASN][1000 genomes]
rs2181182	0.96[ASN][1000 genomes]
rs2181183	0.96[ASN][1000 genomes]
rs2475512	0.95[ASN][1000 genomes]
rs2475514	0.96[ASN][1000 genomes]
rs2475515	0.96[ASN][1000 genomes]
rs2475518	0.84[ASN][1000 genomes]
rs2475519	0.96[ASN][1000 genomes]
rs2475520	0.86[ASN][1000 genomes]
rs2475523	0.96[ASN][1000 genomes]
rs2475524	0.96[ASN][1000 genomes]
rs2475525	0.96[ASN][1000 genomes]
rs2475546	0.88[ASN][1000 genomes]
rs2475548	0.86[ASN][1000 genomes]
rs2475550	0.96[ASN][1000 genomes]
rs2475551	0.96[ASN][1000 genomes]
rs2479778	0.96[ASN][1000 genomes]
rs2479779	0.86[ASN][1000 genomes]
rs2479781	0.86[ASN][1000 genomes]
rs2479785	0.96[ASN][1000 genomes]
rs2479786	0.96[ASN][1000 genomes]
rs2479787	0.86[ASN][1000 genomes]
rs2987344	0.88[ASN][1000 genomes]
rs326513	0.89[ASN][1000 genomes]
rs326514	0.89[ASN][1000 genomes]
rs326515	0.89[ASN][1000 genomes]
rs326517	0.89[ASN][1000 genomes]
rs326524	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs326526	0.87[ASN][1000 genomes]
rs4262810	0.95[ASN][1000 genomes]
rs4769676	0.86[ASN][1000 genomes]
rs7994068	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9506080	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9506089	0.96[ASN][1000 genomes]
rs9508238	0.80[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs9550435	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533835	chr13:29141132-29962069	Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Enhancers Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
2	esv3406145	chr13:29616606-29917459	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:29606200-29623600	Weak transcription	Aorta	Aorta
2	chr13:29612400-29633600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr13:29619200-29623200	Enhancers	Fetal Heart	heart

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