Variant report

Variant	rs184501089
Chromosome Location	chr6:143905524-143905525
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:143899013..143902329-chr6:143903736..143905850,3	K562	blood:
2	chr6:143897560..143900872-chr6:143902459..143905862,4	K562	blood:
3	chr6:143903236..143905601-chr6:143907118..143909608,2	K562	blood:

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv7972	chr6:143905304-143911787	Enhancers ZNF genes & repeats Weak transcription Genic enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143894400-143907600	Weak transcription	Stomach Mucosa	stomach
2	chr6:143895600-143918200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
3	chr6:143897600-143907600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr6:143899400-143918000	Weak transcription	Spleen	Spleen
5	chr6:143899800-143919200	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr6:143900400-143907000	Weak transcription	Rectal Mucosa Donor 29	rectum
7	chr6:143900800-143918200	Weak transcription	Duodenum Smooth Muscle	Duodenum
8	chr6:143901000-143907400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr6:143901200-143918000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr6:143901400-143906200	Weak transcription	Fetal Muscle Trunk	muscle
11	chr6:143903200-143912600	Weak transcription	Primary T cells fromperipheralblood	blood
12	chr6:143903400-143905800	Weak transcription	Fetal Intestine Small	intestine
13	chr6:143903400-143911800	Weak transcription	Fetal Intestine Large	intestine
14	chr6:143903400-143918200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
15	chr6:143903600-143907600	Weak transcription	Rectal Mucosa Donor 31	rectum
16	chr6:143903600-143912200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
17	chr6:143903600-143918600	Weak transcription	Primary T helper cells PMA-I stimulated	--
18	chr6:143904200-143905600	Enhancers	Placenta	Placenta
19	chr6:143904400-143905800	Enhancers	NHDF-Ad	bronchial
20	chr6:143904400-143908000	Enhancers	Fetal Muscle Leg	muscle
21	chr6:143904600-143905600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr6:143904600-143906000	Enhancers	NHLF	lung
23	chr6:143904600-143908000	Enhancers	Fetal Stomach	stomach
24	chr6:143904800-143905600	Enhancers	Muscle Satellite Cultured Cells	--
25	chr6:143904800-143905600	Enhancers	NH-A	brain
26	chr6:143904800-143905600	Enhancers	Osteobl	bone
27	chr6:143904800-143906600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr6:143904800-143906600	Enhancers	Fetal Lung	lung
29	chr6:143905000-143905600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
30	chr6:143905000-143907600	Weak transcription	Sigmoid Colon	Sigmoid Colon
31	chr6:143905400-143906400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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