Variant report

Variant	rs184570311
Chromosome Location	chr2:179724817-179724818
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834470	chr2:179555152-179728726	Active TSS Genic enhancers Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv934108	chr2:179556852-179729925	Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv949133	chr2:179711376-180124327	Flanking Active TSS ZNF genes & repeats Active TSS Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
4	esv3432797	chr2:179724517-179724846	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:54 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:179693400-179726000	Weak transcription	Fetal Muscle Trunk	muscle
2	chr2:179695800-179738400	Weak transcription	Fetal Intestine Large	intestine
3	chr2:179696400-179728800	Weak transcription	Primary T cells fromperipheralblood	blood
4	chr2:179702200-179749200	Weak transcription	Thymus	Thymus
5	chr2:179702400-179729200	Weak transcription	Lung	lung
6	chr2:179702400-179730000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
7	chr2:179702800-179728600	Weak transcription	Pancreas	Pancrea
8	chr2:179708000-179727800	Weak transcription	Psoas Muscle	Psoas
9	chr2:179710800-179782800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
10	chr2:179711600-179728000	Weak transcription	HUES48 Cell Line	embryonic stem cell
11	chr2:179711600-179728400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
12	chr2:179712000-179727000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
13	chr2:179712200-179725800	Weak transcription	Left Ventricle	heart
14	chr2:179713400-179729200	Weak transcription	Primary B cells from peripheral blood	blood
15	chr2:179713400-179778600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
16	chr2:179717000-179790600	Weak transcription	Primary T helper cells PMA-I stimulated	--
17	chr2:179718200-179728600	Weak transcription	Primary T helper cells fromperipheralblood	blood
18	chr2:179718200-179728800	Weak transcription	Primary B cells from cord blood	blood
19	chr2:179718400-179728400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
20	chr2:179719800-179725400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr2:179720200-179728000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr2:179720800-179726400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
23	chr2:179721000-179727800	Weak transcription	Primary T cells from cord blood	blood
24	chr2:179722000-179725600	Enhancers	Fetal Heart	heart
25	chr2:179722400-179728800	Weak transcription	Aorta	Aorta
26	chr2:179723600-179725600	Enhancers	HSMMtube	muscle
27	chr2:179723800-179725000	Enhancers	Brain Cingulate Gyrus	brain
28	chr2:179723800-179725200	Enhancers	Fetal Brain Female	brain
29	chr2:179723800-179725800	Enhancers	Brain Hippocampus Middle	brain
30	chr2:179723800-179726000	Enhancers	HSMM	muscle
31	chr2:179723800-179726200	Enhancers	Fetal Stomach	stomach
32	chr2:179724000-179725000	Enhancers	Cortex derived primary cultured neurospheres	brain
33	chr2:179724000-179725000	Enhancers	Stomach Smooth Muscle	stomach
34	chr2:179724000-179725600	Enhancers	Brain Inferior Temporal Lobe	brain
35	chr2:179724000-179726200	Enhancers	Fetal Brain Male	brain
36	chr2:179724200-179727800	Weak transcription	NHDF-Ad	bronchial
37	chr2:179724200-179729600	Weak transcription	Brain Substantia Nigra	brain
38	chr2:179724200-179730400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
39	chr2:179724400-179725400	Weak transcription	Fetal Lung	lung
40	chr2:179724400-179726800	Enhancers	Fetal Muscle Leg	muscle
41	chr2:179724400-179728600	Weak transcription	Ovary	ovary
42	chr2:179724600-179728000	Weak transcription	Duodenum Smooth Muscle	Duodenum
43	chr2:179724600-179733400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
44	chr2:179724800-179725600	Weak transcription	Skeletal Muscle Female	skeletal muscle
45	chr2:179724800-179726400	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
46	chr2:179724800-179727600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
47	chr2:179724800-179727800	Weak transcription	Muscle Satellite Cultured Cells	--
48	chr2:179724800-179727800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
49	chr2:179724800-179728000	Weak transcription	Brain Germinal Matrix	brain
50	chr2:179724800-179728600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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