Variant report

Variant	rs184623148
Chromosome Location	chr1:114172004-114172005
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1012324	chr1:114135133-114206843	Enhancers Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv872161	chr1:114162194-114280135	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
3	esv3411046	chr1:114171753-114172010	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:114100600-114173400	Weak transcription	Gastric	stomach
2	chr1:114119200-114172400	Weak transcription	Pancreas	Pancrea
3	chr1:114119200-114173000	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr1:114124400-114172400	Weak transcription	Aorta	Aorta
5	chr1:114140600-114172800	Weak transcription	Colonic Mucosa	Colon
6	chr1:114151400-114172600	Weak transcription	Ovary	ovary
7	chr1:114154000-114172400	Weak transcription	Fetal Stomach	stomach
8	chr1:114159000-114172200	Weak transcription	NH-A	brain
9	chr1:114159000-114173200	Weak transcription	HUES48 Cell Line	embryonic stem cell
10	chr1:114159000-114195000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr1:114159200-114194800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr1:114161600-114172400	Weak transcription	Placenta	Placenta
13	chr1:114161600-114184600	Weak transcription	Colon Smooth Muscle	Colon
14	chr1:114161600-114184600	Weak transcription	HepG2	liver
15	chr1:114161800-114199800	Weak transcription	Skeletal Muscle Female	skeletal muscle
16	chr1:114162200-114184600	Weak transcription	Left Ventricle	heart
17	chr1:114164000-114172600	Weak transcription	Rectal Mucosa Donor 29	rectum
18	chr1:114165200-114172400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr1:114166600-114172800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr1:114167000-114172600	Weak transcription	Liver	Liver
21	chr1:114168000-114173000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
22	chr1:114169200-114189400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr1:114169400-114173000	Weak transcription	Duodenum Mucosa	Duodenum
24	chr1:114169400-114184600	Weak transcription	Rectal Mucosa Donor 31	rectum
25	chr1:114169600-114172400	Weak transcription	Esophagus	oesophagus
26	chr1:114170000-114172600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
27	chr1:114170800-114184600	Weak transcription	Stomach Smooth Muscle	stomach
28	chr1:114171000-114172600	Weak transcription	Skeletal Muscle Male	skeletal muscle
29	chr1:114171200-114174400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
30	chr1:114171400-114172400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
31	chr1:114171600-114173000	ZNF genes & repeats	Fetal Intestine Large	intestine
32	chr1:114171600-114241400	Weak transcription	Right Ventricle	heart
33	chr1:114171800-114173400	Strong transcription	Fetal Lung	lung
34	chr1:114172000-114174400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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