Variant report

Variant	rs184677369
Chromosome Location	chr2:188216090-188216091
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:14 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949700	chr2:187713412-188361211	Flanking Active TSS Strong transcription Enhancers ZNF genes & repeats Weak transcription Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	nsv1003061	chr2:187950057-188282330	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv1000617	chr2:187950057-188290511	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv533935	chr2:188089148-188284766	Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	nsv834487	chr2:188182556-188353363	Strong transcription Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases
6	esv3383427	chr2:188215007-188217055	Weak transcription Strong transcription Enhancers	n/a	n/a	inside rSNPs	diseases
7	esv6916	chr2:188215484-188216302	Weak transcription Enhancers Strong transcription	n/a	n/a	inside rSNPs	diseases
8	esv3436814	chr2:188215507-188216555	Weak transcription Strong transcription Enhancers	n/a	n/a	inside rSNPs	diseases
9	esv2249015	chr2:188215530-188216232	Strong transcription Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
10	esv3458859	chr2:188215600-188216127	Strong transcription Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
11	esv3496505	chr2:188215628-188216129	Weak transcription Strong transcription	n/a	n/a	inside rSNPs	diseases
12	esv3496510	chr2:188215629-188216137	Weak transcription Strong transcription	n/a	n/a	inside rSNPs	diseases
13	esv3458860	chr2:188215658-188216095	Weak transcription Strong transcription	n/a	n/a	inside rSNPs	diseases
14	esv3033	chr2:188215671-188216167	Weak transcription Strong transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:188203200-188218200	Weak transcription	Aorta	Aorta
2	chr2:188203800-188222400	Weak transcription	Fetal Muscle Leg	muscle
3	chr2:188204000-188253600	Weak transcription	Fetal Muscle Trunk	muscle
4	chr2:188208800-188250400	Weak transcription	Primary T cells from cord blood	blood
5	chr2:188209000-188229600	Weak transcription	Fetal Thymus	thymus
6	chr2:188209200-188222600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
7	chr2:188209600-188221400	Weak transcription	Fetal Kidney	kidney
8	chr2:188209800-188233400	Weak transcription	Right Ventricle	heart
9	chr2:188210600-188223200	Weak transcription	Left Ventricle	heart
10	chr2:188210800-188248000	Weak transcription	HSMMtube	muscle
11	chr2:188212200-188222600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr2:188214000-188217000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr2:188214400-188216200	Weak transcription	Adipose Nuclei	Adipose
14	chr2:188214600-188250800	Weak transcription	Fetal Lung	lung
15	chr2:188214600-188257800	Weak transcription	Ovary	ovary
16	chr2:188214800-188217800	Strong transcription	HUVEC	blood vessel
17	chr2:188215000-188218800	Weak transcription	Primary monocytes fromperipheralblood	blood
18	chr2:188215000-188218800	Weak transcription	Monocytes-CD14+_RO01746	blood
19	chr2:188215000-188224600	Weak transcription	Muscle Satellite Cultured Cells	--
20	chr2:188215400-188217000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr2:188215400-188217000	Strong transcription	Primary hematopoietic stem cells	blood
22	chr2:188215600-188216600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr2:188215600-188222600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr2:188215600-188222600	Weak transcription	Skeletal Muscle Male	skeletal muscle
25	chr2:188215600-188225200	Weak transcription	Esophagus	oesophagus

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