Variant report

Variant	rs1847490
Chromosome Location	chr3:68678822-68678823
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs1847489	0.85[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs1847491	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3324561	chr3:68677687-68680235	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
2	esv3410667	chr3:68677937-68680260	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
3	esv3391853	chr3:68678462-68679860	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:68676600-68679800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr3:68677600-68680400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr3:68678000-68680800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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