| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1044790 |
chr12:42672255-43344184 |
Enhancers Bivalent Enhancer Strong transcription Weak transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
29 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv541483 |
chr12:42672255-43344184 |
Active TSS Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
29 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv832388 |
chr12:42878328-43087069 |
Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
12 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv832389 |
chr12:43003361-43173896 |
Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
11 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv558702 |
chr12:43015354-43027352 |
Enhancers Weak transcription ZNF genes & repeats
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv558703 |
chr12:43015532-43025256 |
Enhancers Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv558704 |
chr12:43015532-43027453 |
Enhancers Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
