Variant report

Variant rs1849740
Chromosome Location chr17:33760302-33760303
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:33749200-33761000 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr17:33757400-33760800 Active TSS ES-I3 Cell Line embryonic stem cell
3 chr17:33757800-33760400 Active TSS HUES64 Cell Line embryonic stem cell
4 chr17:33757800-33760400 Active TSS NHLF lung
5 chr17:33758200-33760400 Active TSS HSMM muscle
6 chr17:33758200-33761000 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
7 chr17:33758400-33760400 Active TSS Fetal Kidney kidney
8 chr17:33758400-33760400 Active TSS Fetal Lung lung
9 chr17:33758400-33760600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr17:33758400-33760800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr17:33758600-33760400 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
12 chr17:33758600-33760400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr17:33758600-33760400 Bivalent/Poised TSS Brain Inferior Temporal Lobe brain
14 chr17:33758600-33760400 Active TSS Rectal Smooth Muscle rectum
15 chr17:33758600-33761000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
16 chr17:33758600-33761000 Active TSS Aorta Aorta
17 chr17:33758600-33761200 Flanking Active TSS Adipose Nuclei Adipose
18 chr17:33758800-33760400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr17:33758800-33760800 Active TSS H9 Cell Line embryonic stem cell
20 chr17:33758800-33760800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
21 chr17:33758800-33760800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
22 chr17:33758800-33760800 Active TSS Colonic Mucosa Colon
23 chr17:33759000-33760400 Active TSS HUES48 Cell Line embryonic stem cell
24 chr17:33759000-33760400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
25 chr17:33759000-33760400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr17:33759000-33760400 Bivalent/Poised TSS Brain Anterior Caudate brain
27 chr17:33759000-33760400 Active TSS Brain Substantia Nigra brain
28 chr17:33759000-33760400 Active TSS Duodenum Smooth Muscle Duodenum
29 chr17:33759000-33760400 Active TSS Rectal Mucosa Donor 31 rectum
30 chr17:33759000-33760400 Active TSS Stomach Mucosa stomach
31 chr17:33759000-33760400 Active TSS Osteobl bone
32 chr17:33759000-33760600 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
33 chr17:33759000-33760600 Active TSS Thymus Thymus
34 chr17:33759200-33760400 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr17:33759200-33760400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
36 chr17:33759200-33760400 Active TSS Breast Myoepithelial Primary Cells Breast
37 chr17:33759200-33760400 Active TSS Esophagus oesophagus
38 chr17:33759200-33760400 Bivalent/Poised TSS Fetal Brain Female brain
39 chr17:33759200-33760400 Active TSS Left Ventricle heart
40 chr17:33759200-33760600 Active TSS Colon Smooth Muscle Colon
41 chr17:33759200-33761000 Active TSS iPS-20b Cell Line embryonic stem cell
42 chr17:33759200-33761000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr17:33759200-33761000 Active TSS Rectal Mucosa Donor 29 rectum
44 chr17:33759200-33761000 Active TSS Right Atrium heart
45 chr17:33759200-33761200 Active TSS Ovary ovary
46 chr17:33759400-33760400 Active TSS H1 Cell Line embryonic stem cell
47 chr17:33759400-33760400 Bivalent/Poised TSS Brain Hippocampus Middle brain
48 chr17:33759400-33760400 Active TSS Duodenum Mucosa Duodenum
49 chr17:33759400-33760400 Active TSS Stomach Smooth Muscle stomach
50 chr17:33759400-33760800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell

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