Variant report

Variant	rs185060341
Chromosome Location	chr8:118874679-118874680
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:118874390..118877427-chr8:119122549..119125397,3	MCF-7	breast:
2	chr8:118874293..118875149-chr8:119132498..119133544,7	MCF-7	breast:
3	chr8:118874257..118874880-chr8:118929262..118930077,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000182197	Chromatin interaction

Extended variants
information (count: 32 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:32 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1019636	chr8:118598433-118946091	Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv539734	chr8:118598433-118946091	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv831439	chr8:118747352-118899118	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv933516	chr8:118764605-119009093	Weak transcription Enhancers Genic enhancers Bivalent Enhancer Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv1030459	chr8:118840179-119155835	Weak transcription Flanking Active TSS Enhancers Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
6	nsv612026	chr8:118871476-118875535	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
7	nsv831440	chr8:118871930-119052269	Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
8	esv3503420	chr8:118873121-118876619	Enhancers Weak transcription Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
9	esv3503421	chr8:118873121-118876619	Enhancers Weak transcription Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
10	esv3481486	chr8:118873566-118875551	Enhancers Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
11	esv3481487	chr8:118873566-118875551	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
12	nsv512062	chr8:118873680-118875924	Enhancers Weak transcription Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
13	esv12380	chr8:118874053-118875618	Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
14	nsv515058	chr8:118874083-118874891	Enhancers Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
15	nsv612027	chr8:118874307-118874870	Enhancers Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
16	nsv612028	chr8:118874307-118875062	Genic enhancers Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
17	nsv612029	chr8:118874307-118875168	Enhancers Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
18	nsv612030	chr8:118874307-118875201	Enhancers Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
19	nsv612031	chr8:118874307-118875308	Enhancers Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
20	nsv612032	chr8:118874307-118875496	Genic enhancers Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
21	nsv612033	chr8:118874307-118875535	Enhancers Genic enhancers Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
22	nsv612034	chr8:118874307-118879130	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
23	nsv612035	chr8:118874307-118881866	Enhancers Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
24	nsv612036	chr8:118874410-118875062	Enhancers Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
25	nsv612037	chr8:118874410-118875168	Enhancers Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
26	nsv612038	chr8:118874410-118875201	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
27	nsv612039	chr8:118874463-118875062	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
28	nsv612040	chr8:118874463-118875168	Enhancers Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
29	nsv612041	chr8:118874515-118875201	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
30	nsv612042	chr8:118874515-118875535	Enhancers Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
31	nsv612043	chr8:118874563-118875201	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
32	nsv612044	chr8:118874563-118875535	Enhancers Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:59 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:118860800-118874800	Weak transcription	Lung	lung
2	chr8:118861200-118875000	Weak transcription	Right Ventricle	heart
3	chr8:118861400-118878600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr8:118861600-118876200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr8:118861600-118878200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr8:118863200-118879600	Weak transcription	Sigmoid Colon	Sigmoid Colon
7	chr8:118863400-118874800	Weak transcription	NH-A	brain
8	chr8:118864200-118874800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr8:118864200-118878600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr8:118870000-118876000	Weak transcription	Fetal Intestine Small	intestine
11	chr8:118870000-118876600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr8:118871600-118874800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr8:118872400-118876000	Enhancers	Breast Myoepithelial Primary Cells	Breast
14	chr8:118872600-118875600	Enhancers	HMEC	breast
15	chr8:118872600-118876000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr8:118872600-118876400	Enhancers	Colon Smooth Muscle	Colon
17	chr8:118872800-118876400	Enhancers	Liver	Liver
18	chr8:118873000-118875000	Enhancers	Osteobl	bone
19	chr8:118873200-118874800	Weak transcription	Right Atrium	heart
20	chr8:118873200-118875400	Weak transcription	Rectal Smooth Muscle	rectum
21	chr8:118873200-118875800	Weak transcription	Small Intestine	intestine
22	chr8:118873200-118876400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr8:118873400-118876200	Enhancers	Rectal Mucosa Donor 31	rectum
24	chr8:118873600-118896200	Weak transcription	Fetal Stomach	stomach
25	chr8:118873800-118876200	Enhancers	NHLF	lung
26	chr8:118874000-118875600	Enhancers	Muscle Satellite Cultured Cells	--
27	chr8:118874000-118876000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr8:118874000-118876200	Enhancers	Fetal Lung	lung
29	chr8:118874000-118876200	Enhancers	Ovary	ovary
30	chr8:118874000-118881200	Weak transcription	Fetal Muscle Trunk	muscle
31	chr8:118874200-118874800	Enhancers	HUES6 Cell Line	embryonic stem cell
32	chr8:118874200-118875000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
33	chr8:118874200-118875000	Enhancers	HSMMtube	muscle
34	chr8:118874200-118875400	Enhancers	Rectal Mucosa Donor 29	rectum
35	chr8:118874200-118875400	Enhancers	HSMM	muscle
36	chr8:118874200-118876000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
37	chr8:118874200-118876400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
38	chr8:118874200-118876600	Enhancers	NHDF-Ad	bronchial
39	chr8:118874200-118876800	Enhancers	A549	lung
40	chr8:118874200-118878000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
41	chr8:118874400-118874800	Enhancers	Primary B cells from peripheral blood	blood
42	chr8:118874400-118874800	Enhancers	Colonic Mucosa	Colon
43	chr8:118874400-118874800	Enhancers	Fetal Brain Male	brain
44	chr8:118874400-118876200	Genic enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
45	chr8:118874400-118876200	Enhancers	Fetal Muscle Leg	muscle
46	chr8:118874400-118876200	Enhancers	Stomach Mucosa	stomach
47	chr8:118874400-118876400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
48	chr8:118874400-118876400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
49	chr8:118874600-118874800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
50	chr8:118874600-118875200	Weak transcription	Stomach Smooth Muscle	stomach

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