Variant report

Variant rs185116616
Chromosome Location chr22:22840960-22840961
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:22830600-22842800 Weak transcription Primary B cells from peripheral blood blood
2 chr22:22832600-22861800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr22:22833400-22854400 Weak transcription Brain Hippocampus Middle brain
4 chr22:22835200-22842600 Weak transcription Fetal Intestine Large intestine
5 chr22:22835400-22841200 Weak transcription Fetal Intestine Small intestine
6 chr22:22835400-22846000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr22:22835800-22842000 Weak transcription H1 Cell Line embryonic stem cell
8 chr22:22836000-22842000 Weak transcription HepG2 liver
9 chr22:22837400-22842000 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr22:22837400-22856000 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr22:22837600-22842200 Weak transcription Primary T cells fromperipheralblood blood
12 chr22:22837600-22843000 Weak transcription Fetal Brain Male brain
13 chr22:22837600-22861800 Weak transcription Brain Angular Gyrus brain
14 chr22:22837600-22862000 Weak transcription ES-WA7 Cell Line embryonic stem cell
15 chr22:22838000-22842000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr22:22838000-22842400 Weak transcription Primary T cells from cord blood blood
17 chr22:22838000-22842400 Weak transcription Brain Anterior Caudate brain
18 chr22:22838000-22847800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr22:22838000-22862000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr22:22838200-22842000 Weak transcription Primary B cells from cord blood blood
21 chr22:22838400-22856800 Weak transcription Primary hematopoietic stem cells blood
22 chr22:22838600-22841000 Weak transcription Fetal Muscle Trunk muscle
23 chr22:22838600-22849600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr22:22838600-22861800 Weak transcription Brain Cingulate Gyrus brain
25 chr22:22838800-22844800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
26 chr22:22839000-22841400 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
27 chr22:22839000-22847800 Weak transcription A549 lung
28 chr22:22839000-22862000 Weak transcription NH-A brain
29 chr22:22839200-22843800 Strong transcription Brain Germinal Matrix brain
30 chr22:22839200-22845000 Strong transcription K562 blood
31 chr22:22839400-22843600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr22:22839400-22846000 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr22:22839400-22848800 Strong transcription Fetal Brain Female brain
34 chr22:22839400-22850400 Strong transcription Dnd41 blood
35 chr22:22839400-22862200 Weak transcription Muscle Satellite Cultured Cells --
36 chr22:22839600-22842000 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr22:22839600-22842400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr22:22839600-22849800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr22:22839600-22861600 Weak transcription Fetal Thymus thymus
40 chr22:22839800-22841200 Weak transcription HUES64 Cell Line embryonic stem cell
41 chr22:22839800-22842000 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr22:22839800-22846000 Weak transcription Brain Inferior Temporal Lobe brain
43 chr22:22839800-22862000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr22:22840000-22843200 Weak transcription HUVEC blood vessel
45 chr22:22840200-22841200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
46 chr22:22840200-22841200 Enhancers Fetal Heart heart
47 chr22:22840200-22841600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr22:22840200-22842800 Enhancers HSMMtube muscle
49 chr22:22840600-22841000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr22:22840600-22842000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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