Variant report

Variant	rs185207836
Chromosome Location	chr2:113189461-113189462
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3422414	chr2:112883450-113200285	Strong transcription Weak transcription Bivalent Enhancer Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
2	nsv949573	chr2:112986955-113320975	Strong transcription Active TSS Enhancers Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
3	nsv874871	chr2:113021811-113217630	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
4	esv1801285	chr2:113113618-113200081	Active TSS Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases
5	esv3371480	chr2:113189306-113191854	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:41 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:113184400-113189600	Weak transcription	Primary neutrophils fromperipheralblood	blood
2	chr2:113188000-113189600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
3	chr2:113188800-113189800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
4	chr2:113188800-113190000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
5	chr2:113188800-113190000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
6	chr2:113188800-113190000	Enhancers	Primary T helper cells fromperipheralblood	blood
7	chr2:113189000-113189600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr2:113189000-113189600	Enhancers	Skeletal Muscle Male	skeletal muscle
9	chr2:113189000-113189600	Enhancers	HepG2	liver
10	chr2:113189000-113189800	Enhancers	Primary T killer memory cells from peripheral blood	blood
11	chr2:113189000-113189800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr2:113189000-113190000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
13	chr2:113189000-113190400	Active TSS	Brain Angular Gyrus	brain
14	chr2:113189000-113191200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr2:113189000-113191200	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr2:113189000-113191200	Active TSS	Liver	Liver
17	chr2:113189200-113189600	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr2:113189200-113189600	Enhancers	Primary T regulatory cells fromperipheralblood	blood
19	chr2:113189200-113189600	Weak transcription	Brain Cingulate Gyrus	brain
20	chr2:113189200-113189600	Enhancers	Brain Hippocampus Middle	brain
21	chr2:113189200-113189600	Enhancers	Brain Inferior Temporal Lobe	brain
22	chr2:113189200-113189600	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
23	chr2:113189200-113189600	Enhancers	HSMMtube	muscle
24	chr2:113189200-113189600	Weak transcription	NHEK	skin
25	chr2:113189200-113190000	Enhancers	Primary T cells fromperipheralblood	blood
26	chr2:113189200-113190200	Enhancers	Primary T helper naive cells from peripheral blood	blood
27	chr2:113189200-113191200	Active TSS	Osteobl	bone
28	chr2:113189400-113189600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
29	chr2:113189400-113189600	Active TSS	Adipose Nuclei	Adipose
30	chr2:113189400-113189600	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
31	chr2:113189400-113189600	Flanking Active TSS	HUVEC	blood vessel
32	chr2:113189400-113189600	Enhancers	Monocytes-CD14+_RO01746	blood
33	chr2:113189400-113189800	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
34	chr2:113189400-113189800	Enhancers	Fetal Brain Female	brain
35	chr2:113189400-113190600	Enhancers	Primary B cells from cord blood	blood
36	chr2:113189400-113191200	Active TSS	Breast Myoepithelial Primary Cells	Breast
37	chr2:113189400-113191200	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
38	chr2:113189400-113191200	Active TSS	Colonic Mucosa	Colon
39	chr2:113189400-113191200	Active TSS	Hela-S3	cervix
40	chr2:113189400-113191200	Active TSS	HSMM	muscle
41	chr2:113189400-113191400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain

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