Variant report

Variant	rs185229209
Chromosome Location	chr11:16597518-16597519
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:15 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv553566	chr11:16329009-16799044	Strong transcription Weak transcription Enhancers Bivalent/Poised TSS ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
2	nsv897016	chr11:16455794-16691743	Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv983173	chr11:16581343-16600284	Weak transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	esv3325375	chr11:16596601-16599149	Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	esv3338520	chr11:16596851-16598849	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
6	esv8413	chr11:16597333-16598162	Weak transcription	n/a	n/a	inside rSNPs	diseases
7	esv2078648	chr11:16597376-16598095	Weak transcription	n/a	n/a	inside rSNPs	diseases
8	esv3321567	chr11:16597376-16598374	Weak transcription	n/a	n/a	inside rSNPs	diseases
9	esv3457230	chr11:16597444-16597984	Weak transcription	n/a	n/a	inside rSNPs	diseases
10	esv3492716	chr11:16597474-16597996	Weak transcription	n/a	n/a	inside rSNPs	diseases
11	esv3492719	chr11:16597478-16597973	Weak transcription	n/a	n/a	inside rSNPs	diseases
12	esv3492717	chr11:16597492-16597921	Weak transcription	n/a	n/a	inside rSNPs	diseases
13	esv3457208	chr11:16597507-16597952	Weak transcription	n/a	n/a	inside rSNPs	diseases
14	esv3492713	chr11:16597511-16597942	Weak transcription	n/a	n/a	inside rSNPs	diseases
15	esv3457219	chr11:16597512-16597911	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:16584400-16605600	Weak transcription	Skeletal Muscle Female	skeletal muscle
2	chr11:16593400-16598400	Weak transcription	Left Ventricle	heart
3	chr11:16595200-16598400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr11:16595200-16608200	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr11:16595400-16609200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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