Variant report

Variant	rs185320280
Chromosome Location	chr10:23632003-23632004
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:23627063..23628763-chr10:23630425..23632058,2	MCF-7	breast:
2	chr10:23631888..23635089-chr10:23727661..23730060,4	MCF-7	breast:

Variant related genes	Relation type
ENSG00000165312	Chromatin interaction

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3357321	chr10:23631971-23634519	Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:48 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23599800-23632200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr10:23627400-23632600	Weak transcription	Left Ventricle	heart
3	chr10:23628000-23632400	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr10:23628400-23632400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
5	chr10:23628600-23632200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr10:23628600-23632400	Weak transcription	HMEC	breast
7	chr10:23628600-23632400	Weak transcription	NHEK	skin
8	chr10:23628600-23632600	Enhancers	Primary T helper cells PMA-I stimulated	--
9	chr10:23628600-23632600	Weak transcription	Right Atrium	heart
10	chr10:23628600-23632800	Weak transcription	Liver	Liver
11	chr10:23628800-23632400	Weak transcription	Osteobl	bone
12	chr10:23628800-23632600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
13	chr10:23629400-23632200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr10:23629400-23632200	Enhancers	Primary T cells fromperipheralblood	blood
15	chr10:23629400-23632400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
16	chr10:23630400-23632400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr10:23630400-23632400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr10:23630400-23632400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr10:23630400-23632400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr10:23630400-23633200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
21	chr10:23630400-23633200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
22	chr10:23630600-23632400	Weak transcription	Fetal Kidney	kidney
23	chr10:23630600-23632600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
24	chr10:23630600-23633200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
25	chr10:23631000-23632200	Enhancers	Hela-S3	cervix
26	chr10:23631200-23632400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
27	chr10:23631200-23632600	Bivalent Enhancer	Placenta	Placenta
28	chr10:23631400-23632400	Bivalent Enhancer	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
29	chr10:23631400-23633400	Enhancers	Fetal Heart	heart
30	chr10:23631600-23632200	Enhancers	Brain Anterior Caudate	brain
31	chr10:23631600-23632400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
32	chr10:23631600-23632400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
33	chr10:23631600-23632400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
34	chr10:23631600-23632400	Weak transcription	Primary T helper cells fromperipheralblood	blood
35	chr10:23631600-23632600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
36	chr10:23631800-23632200	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
37	chr10:23631800-23632400	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
38	chr10:23631800-23632400	Bivalent Enhancer	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
39	chr10:23631800-23632400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr10:23631800-23632400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
41	chr10:23631800-23632600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
42	chr10:23632000-23632200	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
43	chr10:23632000-23632200	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
44	chr10:23632000-23632200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
45	chr10:23632000-23632400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
46	chr10:23632000-23632800	Flanking Bivalent TSS/Enh	iPS-18 Cell Line	embryonic stem cell
47	chr10:23632000-23633400	Enhancers	Lung	lung
48	chr10:23632000-23634000	Active TSS	Brain Hippocampus Middle	brain

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