Variant report

Variant rs185539956
Chromosome Location chr12:29844559-29844560
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:29820200-29851600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr12:29825400-29847800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr12:29828600-29854000 Weak transcription Aorta Aorta
4 chr12:29830000-29854000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr12:29830000-29861600 Weak transcription Fetal Muscle Leg muscle
6 chr12:29830200-29857400 Weak transcription HSMM muscle
7 chr12:29830400-29857400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr12:29830600-29858000 Weak transcription Stomach Smooth Muscle stomach
9 chr12:29830800-29862600 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr12:29831400-29850400 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr12:29835000-29846800 Weak transcription Right Ventricle heart
12 chr12:29837600-29864200 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr12:29838000-29851800 Weak transcription Muscle Satellite Cultured Cells --
14 chr12:29839400-29858400 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr12:29840600-29859000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr12:29842000-29847800 Weak transcription Psoas Muscle Psoas
17 chr12:29842200-29847000 Weak transcription Fetal Heart heart
18 chr12:29842400-29847600 Weak transcription Left Ventricle heart
19 chr12:29842600-29845600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
20 chr12:29842800-29844800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
21 chr12:29843000-29845200 Enhancers iPS-15b Cell Line embryonic stem cell
22 chr12:29843200-29845200 Enhancers HUES64 Cell Line embryonic stem cell
23 chr12:29843800-29844600 Enhancers Primary neutrophils fromperipheralblood blood
24 chr12:29843800-29844600 Enhancers NHEK skin
25 chr12:29843800-29844800 Enhancers HUES6 Cell Line embryonic stem cell
26 chr12:29843800-29844800 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
27 chr12:29843800-29845000 Enhancers Primary monocytes fromperipheralblood blood
28 chr12:29844000-29844600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr12:29844000-29844800 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
30 chr12:29844000-29845400 Enhancers ES-I3 Cell Line embryonic stem cell
31 chr12:29844200-29844600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
32 chr12:29844200-29844800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr12:29844200-29844800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr12:29844200-29844800 Enhancers HMEC breast
35 chr12:29844200-29845400 Enhancers HUES48 Cell Line embryonic stem cell
36 chr12:29844400-29851600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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