Variant report

Variant	rs185838549
Chromosome Location	chr14:40816825-40816826
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2751272	chr14:40216880-40913230	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv901663	chr14:40640214-40879975	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	esv1817307	chr14:40647649-40833306	Active TSS Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv901664	chr14:40663978-41432350	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
5	nsv1040019	chr14:40674730-40891003	Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
6	nsv542050	chr14:40674730-40891003	Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
7	nsv901666	chr14:40701679-40859517	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
8	nsv901667	chr14:40701679-40863379	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
9	nsv1045746	chr14:40759826-40852546	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
10	esv3424823	chr14:40816251-40835900	Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:40815400-40817800	Active TSS	HUES48 Cell Line	embryonic stem cell
2	chr14:40815400-40817800	Active TSS	iPS-15b Cell Line	embryonic stem cell
3	chr14:40815600-40817800	Active TSS	HUES6 Cell Line	embryonic stem cell
4	chr14:40815800-40817600	Active TSS	iPS-20b Cell Line	embryonic stem cell
5	chr14:40815800-40817800	Active TSS	H1 Cell Line	embryonic stem cell
6	chr14:40815800-40817800	Active TSS	HUES64 Cell Line	embryonic stem cell
7	chr14:40816000-40817800	Active TSS	ES-I3 Cell Line	embryonic stem cell
8	chr14:40816600-40817600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
9	chr14:40816600-40817800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr14:40816800-40817200	Active TSS	iPS-18 Cell Line	embryonic stem cell
11	chr14:40816800-40817200	Enhancers	Fetal Kidney	kidney
12	chr14:40816800-40817600	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr14:40816800-40817600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr14:40816800-40817800	Active TSS	H9 Cell Line	embryonic stem cell
15	chr14:40816800-40817800	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr14:40816800-40817800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
17	chr14:40816800-40817800	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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