Variant report

Variant	rs186055897
Chromosome Location	chr11:119489406-119489407
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1042460	chr11:119430954-119540452	Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv898419	chr11:119488646-119518006	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv898420	chr11:119488646-119541332	Enhancers Genic enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:119485200-119489600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr11:119485400-119489800	Enhancers	HUVEC	blood vessel
3	chr11:119485400-119490400	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr11:119487600-119489800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr11:119487800-119489800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr11:119488000-119489600	Enhancers	iPS-18 Cell Line	embryonic stem cell
7	chr11:119488000-119489600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
8	chr11:119488400-119489600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
9	chr11:119488600-119494600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr11:119488800-119494600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr11:119489000-119489600	Enhancers	Brain Angular Gyrus	brain
12	chr11:119489000-119489600	Weak transcription	Brain Inferior Temporal Lobe	brain
13	chr11:119489000-119489800	Enhancers	Brain Cingulate Gyrus	brain
14	chr11:119489000-119490000	Enhancers	Brain Substantia Nigra	brain
15	chr11:119489000-119493200	Weak transcription	Fetal Muscle Trunk	muscle
16	chr11:119489000-119493400	Weak transcription	Brain Anterior Caudate	brain
17	chr11:119489200-119489600	Enhancers	Primary hematopoietic stem cells	blood
18	chr11:119489200-119490000	Enhancers	Brain Hippocampus Middle	brain
19	chr11:119489200-119490400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
20	chr11:119489200-119494200	Weak transcription	HUES6 Cell Line	embryonic stem cell
21	chr11:119489200-119494600	Weak transcription	HUES48 Cell Line	embryonic stem cell
22	chr11:119489400-119489800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
23	chr11:119489400-119493400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
24	chr11:119489400-119494400	Weak transcription	iPS-15b Cell Line	embryonic stem cell

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