Variant report

Variant	rs186066387
Chromosome Location	chr12:120888524-120888525
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1)
CpG islands
(count:0)
Chromatin interactive
region (count:1)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr12:120888465-120888534	A549	lung:	n/a	n/a

No data

(count:1 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:120883001..120885733-chr12:120888427..120893155,6	K562	blood:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TRIAP1-1	chr12:120888217-120888696	NONHSAT031173
2	lnc-TRIAP1-1	chr12:120888240-120888606	NONHSAT031174

No data

Variant related genes	Relation type
TRIAP1	TF binding region
ENSG00000170855	Chromatin interaction
ENSG00000257218	Chromatin interaction

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv983369	chr12:120887964-120888585	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:120884800-120893000	Weak transcription	Aorta	Aorta
2	chr12:120884800-120893200	Weak transcription	Small Intestine	intestine
3	chr12:120885000-120893800	Weak transcription	Ovary	ovary
4	chr12:120885400-120892200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr12:120885400-120892200	Weak transcription	Left Ventricle	heart
6	chr12:120885400-120892600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr12:120885400-120893200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr12:120885400-120893200	Weak transcription	Colonic Mucosa	Colon
9	chr12:120885400-120893800	Weak transcription	Esophagus	oesophagus
10	chr12:120885400-120893800	Weak transcription	Lung	lung
11	chr12:120885400-120894000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr12:120885400-120895600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr12:120885400-120904400	Strong transcription	Fetal Muscle Trunk	muscle
14	chr12:120885400-120906000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
15	chr12:120885400-120906000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
16	chr12:120885600-120890000	Weak transcription	Primary neutrophils fromperipheralblood	blood
17	chr12:120885600-120890000	Weak transcription	HMEC	breast
18	chr12:120885600-120890400	Weak transcription	Fetal Lung	lung
19	chr12:120885600-120892600	Weak transcription	Adipose Nuclei	Adipose
20	chr12:120885600-120893800	Weak transcription	HSMMtube	muscle
21	chr12:120885600-120894000	Weak transcription	Brain Anterior Caudate	brain
22	chr12:120885600-120894400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
23	chr12:120885600-120896400	Weak transcription	Pancreatic Islets	Pancreatic Islet
24	chr12:120885600-120904000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr12:120885600-120904000	Strong transcription	Fetal Stomach	stomach
26	chr12:120885800-120888800	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
27	chr12:120885800-120888800	Strong transcription	Fetal Intestine Large	intestine
28	chr12:120885800-120889000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
29	chr12:120885800-120889400	Strong transcription	iPS-18 Cell Line	embryonic stem cell
30	chr12:120885800-120890000	Weak transcription	Skeletal Muscle Male	skeletal muscle
31	chr12:120885800-120890200	Weak transcription	Skeletal Muscle Female	skeletal muscle
32	chr12:120885800-120890600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
33	chr12:120885800-120890600	Weak transcription	Duodenum Smooth Muscle	Duodenum
34	chr12:120885800-120890600	Weak transcription	Stomach Mucosa	stomach
35	chr12:120885800-120890800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr12:120885800-120890800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
37	chr12:120885800-120890800	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
38	chr12:120885800-120890800	Weak transcription	Placenta Amnion	Placenta Amnion
39	chr12:120885800-120890800	Weak transcription	Stomach Smooth Muscle	stomach
40	chr12:120885800-120891200	Weak transcription	NHDF-Ad	bronchial
41	chr12:120885800-120893200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
42	chr12:120885800-120893800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
43	chr12:120885800-120894000	Weak transcription	Brain Angular Gyrus	brain
44	chr12:120885800-120894000	Weak transcription	Psoas Muscle	Psoas
45	chr12:120885800-120894000	Weak transcription	HUVEC	blood vessel
46	chr12:120885800-120894200	Weak transcription	Brain Cingulate Gyrus	brain
47	chr12:120885800-120894200	Weak transcription	Brain Substantia Nigra	brain
48	chr12:120885800-120897800	Weak transcription	Fetal Heart	heart
49	chr12:120885800-120904200	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
50	chr12:120885800-120904400	Strong transcription	Fetal Muscle Leg	muscle

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