The 2.0 version of rSNPBase

Variant report

Variant rs186202890
Chromosome Location chr12:103889132-103889133
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:103886400-103889200 Enhancers HMEC breast
2 chr12:103887400-103889400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr12:103888200-103889600 Active TSS Thymus Thymus
4 chr12:103888400-103889200 Enhancers Fetal Brain Male brain
5 chr12:103888400-103889800 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
6 chr12:103888400-103890000 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
7 chr12:103888400-103890200 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
8 chr12:103888400-103890200 Active TSS H9 Cell Line embryonic stem cell
9 chr12:103888400-103890200 Active TSS Brain Angular Gyrus brain
10 chr12:103888600-103889200 Flanking Active TSS Primary B cells from peripheral blood blood
11 chr12:103888600-103889200 Flanking Active TSS Primary T cells fromperipheralblood blood
12 chr12:103888600-103889200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
13 chr12:103888600-103889400 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
14 chr12:103888600-103889400 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr12:103888600-103889600 Active TSS HUES48 Cell Line embryonic stem cell
16 chr12:103888600-103889600 Bivalent Enhancer Fetal Muscle Leg muscle
17 chr12:103888600-103890000 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
18 chr12:103888600-103890200 Active TSS iPS-15b Cell Line embryonic stem cell
19 chr12:103888800-103889200 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
20 chr12:103888800-103889200 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr12:103888800-103889200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
22 chr12:103888800-103889200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr12:103888800-103889200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr12:103888800-103889200 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
25 chr12:103888800-103889200 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
26 chr12:103888800-103889400 Active TSS Right Atrium heart
27 chr12:103888800-103889600 Active TSS Primary T killer naive cells fromperipheralblood blood
28 chr12:103888800-103889600 Active TSS Primary mononuclear cells fromperipheralblood Blood
29 chr12:103888800-103889600 Active TSS Brain Substantia Nigra brain
30 chr12:103888800-103889800 Active TSS H1 Cell Line embryonic stem cell
31 chr12:103888800-103889800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr12:103888800-103889800 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr12:103888800-103889800 Active TSS iPS-20b Cell Line embryonic stem cell
34 chr12:103888800-103889800 Bivalent/Poised TSS Brain Cingulate Gyrus brain
35 chr12:103888800-103890000 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
36 chr12:103888800-103890000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr12:103888800-103890000 Active TSS iPS-18 Cell Line embryonic stem cell
38 chr12:103888800-103890000 Active TSS Brain Inferior Temporal Lobe brain
39 chr12:103888800-103890000 Enhancers Pancreas Pancrea
40 chr12:103889000-103889200 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr12:103889000-103889200 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr12:103889000-103889200 Bivalent/Poised TSS Primary B cells from cord blood blood
43 chr12:103889000-103889200 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin01 Skin
44 chr12:103889000-103889200 Enhancers NHEK skin
45 chr12:103889000-103889400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
46 chr12:103889000-103889400 Active TSS Brain Germinal Matrix brain
47 chr12:103889000-103889400 Bivalent/Poised TSS Psoas Muscle Psoas
48 chr12:103889000-103889600 Active TSS ES-WA7 Cell Line embryonic stem cell
49 chr12:103889000-103889600 Bivalent/Poised TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr12:103889000-103889600 Weak transcription Primary T helper naive cells from peripheral blood blood

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Last update: Aug 31, 2015