Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:154108106..154110806-chr5:154133073..154135320,2	K562	blood:
2	chr5:154107670..154109549-chr5:154132494..154135385,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CNOT8-4	chr5:154108791-154109254	NONHSAT104710

Variant related genes	Relation type
ENSG00000155506	Chromatin interaction

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021153	chr5:154099869-154147970	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
2	nsv964965	chr5:154108820-154112255	Weak transcription Enhancers	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:154074200-154120000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr5:154102200-154111000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr5:154102200-154117400	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr5:154103000-154111000	Weak transcription	H1 Cell Line	embryonic stem cell
5	chr5:154103800-154110800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr5:154104000-154120000	Weak transcription	Skeletal Muscle Female	skeletal muscle
7	chr5:154104400-154109400	Weak transcription	Stomach Mucosa	stomach
8	chr5:154104400-154118600	Weak transcription	Rectal Mucosa Donor 31	rectum
9	chr5:154104600-154117600	Weak transcription	Sigmoid Colon	Sigmoid Colon
10	chr5:154107200-154133200	Weak transcription	Duodenum Mucosa	Duodenum
11	chr5:154107800-154109200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr5:154108400-154110400	Enhancers	HepG2	liver
13	chr5:154108600-154109000	Enhancers	Cortex derived primary cultured neurospheres	brain
14	chr5:154108600-154109400	Weak transcription	Pancreatic Islets	Pancreatic Islet
15	chr5:154108600-154109600	Enhancers	Liver	Liver
16	chr5:154108600-154112800	Weak transcription	Psoas Muscle	Psoas
17	chr5:154108800-154109600	Enhancers	A549	lung
18	chr5:154108800-154110800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
19	chr5:154108800-154111000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
20	chr5:154108800-154117400	Weak transcription	Pancreas	Pancrea

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