Variant report

Variant	rs186237384
Chromosome Location	chr6:143812619-143812620
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:143810260..143812960-chr6:143821812..143824158,2	MCF-7	breast:
2	chr6:143804354..143808777-chr6:143809039..143815242,7	K562	blood:
3	chr6:143812225..143814473-chr6:143831303..143832883,2	MCF-7	breast:
4	chr6:143801323..143803862-chr6:143812529..143814618,2	K562	blood:

Variant related genes	Relation type
ENSG00000001036	Chromatin interaction
ENSG00000034693	Chromatin interaction
ENSG00000229036	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv965776	chr6:143811602-143816945	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	esv2236231	chr6:143812620-143812621	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	n/a	diseases

No data

Chromatin state (count:115 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143772600-143832000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr6:143772800-143815000	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chr6:143772800-143821200	Weak transcription	Psoas Muscle	Psoas
4	chr6:143773000-143814600	Weak transcription	Rectal Smooth Muscle	rectum
5	chr6:143773000-143814800	Weak transcription	HUES64 Cell Line	embryonic stem cell
6	chr6:143773000-143815000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr6:143773000-143815000	Weak transcription	Colonic Mucosa	Colon
8	chr6:143773200-143827000	Weak transcription	Brain Germinal Matrix	brain
9	chr6:143773400-143814200	Weak transcription	K562	blood
10	chr6:143773400-143814600	Weak transcription	HUVEC	blood vessel
11	chr6:143773400-143814800	Weak transcription	Hela-S3	cervix
12	chr6:143773400-143815000	Weak transcription	A549	lung
13	chr6:143773400-143818200	Weak transcription	Cortex derived primary cultured neurospheres	brain
14	chr6:143773400-143832000	Weak transcription	Fetal Brain Male	brain
15	chr6:143774400-143819400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
16	chr6:143779000-143818200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
17	chr6:143779200-143816800	Weak transcription	Placenta Amnion	Placenta Amnion
18	chr6:143781000-143832000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
19	chr6:143783000-143814600	Weak transcription	Fetal Intestine Small	intestine
20	chr6:143783200-143818400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
21	chr6:143784600-143814800	Weak transcription	HUES48 Cell Line	embryonic stem cell
22	chr6:143784800-143814800	Weak transcription	NHLF	lung
23	chr6:143790200-143814800	Weak transcription	Small Intestine	intestine
24	chr6:143790200-143831600	Weak transcription	Esophagus	oesophagus
25	chr6:143790200-143831600	Weak transcription	Gastric	stomach
26	chr6:143792800-143814800	Weak transcription	NHDF-Ad	bronchial
27	chr6:143793600-143819400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
28	chr6:143794000-143814600	Weak transcription	NH-A	brain
29	chr6:143794400-143814800	Weak transcription	Primary neutrophils fromperipheralblood	blood
30	chr6:143794400-143814800	Weak transcription	Rectal Mucosa Donor 31	rectum
31	chr6:143794400-143816000	Weak transcription	Brain Substantia Nigra	brain
32	chr6:143794600-143814800	Weak transcription	Brain Inferior Temporal Lobe	brain
33	chr6:143794600-143819400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
34	chr6:143794800-143817800	Weak transcription	HSMMtube	muscle
35	chr6:143795200-143827400	Weak transcription	Aorta	Aorta
36	chr6:143795400-143814800	Weak transcription	Osteobl	bone
37	chr6:143795800-143831800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
38	chr6:143796600-143814400	Weak transcription	Primary monocytes fromperipheralblood	blood
39	chr6:143796600-143814600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
40	chr6:143796600-143814600	Weak transcription	Brain Hippocampus Middle	brain
41	chr6:143797000-143814800	Weak transcription	Sigmoid Colon	Sigmoid Colon
42	chr6:143797000-143826600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
43	chr6:143797400-143813400	Weak transcription	Fetal Intestine Large	intestine
44	chr6:143797400-143814600	Weak transcription	HepG2	liver
45	chr6:143797400-143815200	Weak transcription	Fetal Lung	lung
46	chr6:143797400-143819200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
47	chr6:143797600-143814600	Weak transcription	Skeletal Muscle Female	skeletal muscle
48	chr6:143797600-143814600	Weak transcription	Stomach Smooth Muscle	stomach
49	chr6:143797600-143831000	Weak transcription	Skeletal Muscle Male	skeletal muscle
50	chr6:143798000-143814800	Weak transcription	Rectal Mucosa Donor 29	rectum

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